Clostridium cellulosi: CCDG5_0161
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Entry
CCDG5_0161 CDS
T03806
Name
(GenBank) ATP-dependent DNA helicase replicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel03420
Nucleotide excision repair
ccel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCDG5_0161
03430 Mismatch repair
CCDG5_0161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccel03400
]
CCDG5_0161
Enzymes [BR:
ccel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCDG5_0161
DNA repair and recombination proteins [BR:
ccel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCDG5_0161
MMR (mismatch excision repair)
Other MMR factors
CCDG5_0161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
DEAD
PhoH
NPHP3_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
CDZ23305
UniProt:
A0A078KQ72
LinkDB
All DBs
Position
I:182095..184323
Genome browser
AA seq
742 aa
AA seq
DB search
MDENSKEFAYEKRYLESVLSFLKREIYDIREALDIRKRILHRERRELGILVSENRSSGLS
ADISQSIAEDRRQLNAINMMAKLLDRDKKLLASPYFGRFDFIEDGESGPEKFYIGLHNVY
DTGGDGTIYVYDWRAPICSMFYRNELGRASYTAPGGEISGEITLKRQYRIENSKLKYFFD
SSLVINDEVLQETLAHNASPQMRNIVRTIQSEQDLIIRNSESDLLIAQGSAGSGKTTIAL
HRIAYLLYHSAAKGLTSKNIIILSLSRVFSKYIASVLPSLGEENVKEITFDELADSIGIS
VDFDRVEFVDKLLSNERNGSDKLLKSALTFKGSREFAVILERFLRYYTHRLIEFTDISYD
GKIIANREEIKNIFLRDKTGTPPLSRMRRIETILKSRIDIRQKEMHKRLQDKFKAMPEHQ
FDYKSVARLISIKRTNKALKQIMEFTRFSAMDVYKALFSDFGRFKRICKGLGLPDNIEEI
FEYTKESLKNGAGYDDMAALCYLALLIDKPAGFDDIRHVVVDEAQDYLPLHYAVLAKLFP
RASYTILGDIGQSVETGATMGLYKEITEILNKKRPGLMTLNKSYRSSYEITNFSLKIPQE
KPEISAFERHEKEPELIFCEDEKLDERIAADIKAALDEGFGTAAVICPTKRQTRELYERL
SKKIPVTLLEKSGEVKNGALIMPAYLSKGLEFDCVFVPYLDDDNYGGEFSNRLLYIACTR
PLHRLKLYYSKESGILKRLMGQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatagcaaggaatttgcctatgaaaaaagatatctcgagtctgtgctgagt
tttctgaagcgggaaatttatgatatcagggaagcacttgatataagaaaacgtattctc
caccgcgaaaggcgggaactgggtattttagtcagtgagaaccgcagctccggtctgtcg
gccgatatttcacagagtattgccgaagaccggcgccaattgaacgcgataaatatgatg
gcgaaactgcttgaccgcgataaaaagctgcttgcgtcgccgtattttggacgctttgat
tttatagaggacggcgaaagcggaccggaaaaattctatattgggctgcacaacgtctat
gatacgggcggcgacggaactatctatgtctatgactggcgcgcccccatatgcagcatg
ttttacagaaatgaactgggacgggcaagttatacggcgccgggcggagaaatcagcggc
gaaatcactttaaaaaggcagtaccgcatagagaattcaaagctcaaatactttttcgat
tccagccttgtcataaacgacgaggtgcttcaagaaaccttggcgcataatgcctcgccc
cagatgcggaacatagtccggaccatccagagtgagcaggatttgataatccgcaattcg
gaaagcgacttgcttatagcgcaaggctcagccggcagcggtaaaaccaccatagcgctt
caccgcattgcatatctgctttatcacagcgccgctaagggacttacgagcaaaaacatc
atcattttgtccttaagccgcgtatttagcaaatatatagcctctgttctcccatctctc
ggcgaagaaaacgtaaaagagataactttcgatgagctggcggacagtattggcatatca
gtggattttgaccgcgttgaatttgtggacaagctgctgtcaaacgaaagaaacggctcg
gacaaactgctcaagagtgcgctcacttttaaggggtcgagagagtttgcagttattctg
gagcgcttcctgcgttattacacccacaggctgattgaatttaccgatataagctatgac
gggaagattattgcgaaccgcgaggagataaagaatatcttcctgcgggacaagaccggc
acgccgccgctcagccgcatgcgcaggatagagactatcctaaaaagccgaatagatatc
cgtcaaaaggagatgcacaagaggctgcaggataagtttaaggccatgccggaacatcag
tttgactataaaagtgtcgcgcgcttaatatcaataaagaggacaaacaaggcgctgaaa
cagattatggaatttacaaggttcagcgcgatggatgtttataaagcgctgttttcggat
ttcggacgcttcaaaaggatctgcaaaggtcttggactgccggataatattgaagagatt
tttgagtatacaaaagaatcgctgaaaaacggggcaggctatgacgatatggcggcgctc
tgttatctggcgttgcttatagacaaaccggccggatttgacgacataaggcatgtcgtc
gtcgatgaggcgcaggattatctgccactccattacgcagttctcgcaaaacttttcccc
cgcgcttcctataccattctcggcgacatcgggcagtccgttgaaaccggtgcgacgatg
gggctttataaggaaattacagagattctgaataaaaagcgccctgggctgatgactctt
aataagagttaccgcagctcgtatgagattacgaatttctcgctgaaaatcccgcaggag
aagcctgagatttcggcgtttgagcggcacgaaaaggagccggaactgattttctgcgag
gatgagaagctggatgagcgcattgccgcggatataaaagcggcgcttgatgaagggttt
ggcactgcggcggtaatatgcccgacaaagcggcagacaagggaactttatgagcgcctc
tcaaagaagatacctgtgacattgcttgaaaaatcgggtgaggtaaagaacggtgcgctt
attatgcccgcctatctttcaaaaggcctcgagtttgactgcgtttttgtgccttatctt
gatgatgacaattacggcggggagttttcaaacaggctattatatatagcctgcacccgt
ccgctccacagacttaaactttattacagcaaagagagcggtattctcaagcgcctgatg
gggcaataa
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