Clostridium cellulosi: CCDG5_0209
Help
Entry
CCDG5_0209 CDS
T03806
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCDG5_0209 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccel03021
]
CCDG5_0209 (rpoA)
03400 DNA repair and recombination proteins [BR:
ccel03400
]
CCDG5_0209 (rpoA)
Enzymes [BR:
ccel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCDG5_0209 (rpoA)
Transcription machinery [BR:
ccel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCDG5_0209 (rpoA)
DNA repair and recombination proteins [BR:
ccel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCDG5_0209 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SpoIVA_ATPase
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
CDZ23352
UniProt:
A0A078KLL7
LinkDB
All DBs
Position
I:216738..217688
Genome browser
AA seq
316 aa
AA seq
DB search
MIEIEKPKIETAELSPDGSYGRFVVEPLERGYGTTLGNSLRRVLLSSLPGVAVTQVKIDG
VQHEFSTVPGVKEDVTEIILNLKGLTAKLHSDGPKVVYIDAEGECKVTAGDIKADSEVEI
LNPNMHIATLGSGAKLYMEITLDKGRGYVAAEKNKQNMQPAIGVIPVDSIYTPVLKVNYT
VENTRVGQITDYDKLTLEVWTDGTLSAKEAVSIGAKILNEHLNLFIGLCAETQSAEIMVE
KDDKSKEKVLEMTIEELDLSVRSFNCLKRAGINTVEDLINKTEEEMMKVRNLGRKSLEEV
VNKLHSLGFELKKEED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagattgaaaagccaaaaatagaaacagcggagctttcaccagatgggtcatat
ggcagatttgttgtcgagcctcttgaacgcggatacggtacgacactcggcaacagtctt
cgcagagtgcttttgtcttcacttcccggcgttgcggtaacacaggtgaaaattgacggc
gtacagcatgaattttcaactgttcccggcgttaaagaagacgttactgaaataatcctt
aaccttaaaggattaacggcaaagcttcacagcgacggcccgaaagtggtttatatcgac
gccgagggtgaatgcaaggttaccgcaggagatatcaaagcagactcggaagttgagata
cttaacccgaatatgcatatagcgactttaggctccggcgcgaaactttatatggaaata
accctcgacaagggacgcggttatgtagccgcggaaaagaacaagcaaaacatgcagcct
gccatcggagttattccagttgattctatttataccccggttttaaaggtcaactacacc
gtagaaaatacgcgtgtcggccagattaccgattatgataagctcacgctggaagtctgg
accgacggcacgctttccgctaaggaagcggtatctatcggagccaagattctcaatgag
catctcaacctgtttatcggcctatgtgctgagacacagtcggctgagattatggtggag
aaggacgataagagcaaggaaaaggtcctcgagatgactattgaggagcttgacctgtcg
gtgcgttcatttaactgcttaaagcgcgccggcattaatacggttgaagatcttatcaac
aaaacggaagaagaaatgatgaaagttcggaacctgggaagaaagtcgcttgaagaagtt
gtcaacaagctacattcacttggttttgaactcaaaaaggaagaagattaa
DBGET
integrated database retrieval system
