Clostridium cellulosi: CCDG5_0213
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Entry
CCDG5_0213 CDS
T03806
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel03030
DNA replication
ccel03430
Mismatch repair
ccel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCDG5_0213 (polC)
03430 Mismatch repair
CCDG5_0213 (polC)
03440 Homologous recombination
CCDG5_0213 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccel03032
]
CCDG5_0213 (polC)
03400 DNA repair and recombination proteins [BR:
ccel03400
]
CCDG5_0213 (polC)
Enzymes [BR:
ccel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCDG5_0213 (polC)
DNA replication proteins [BR:
ccel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCDG5_0213 (polC)
DNA repair and recombination proteins [BR:
ccel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCDG5_0213 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
Rv2179c-like
DNA_pol3_a_NII
RNase_H_2
tRNA_anti-codon
DNA_pol3_a_NI
HHH_3
YhfH
POT1
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
CDZ23356
UniProt:
A0A078KIJ4
LinkDB
All DBs
Position
I:complement(220691..225025)
Genome browser
AA seq
1444 aa
AA seq
DB search
MAESKSIPQIFVKAAPKGETAEILNNTKILEMSISREDRQIDVTAEFDKIIPFSLLHQYE
IDVAKAYGLNAIKIYPRYDSSLFCERSFFEVIEQLKASIATINGFFNGSECEADGDILRI
KLKNGGADILKSSHCDSEISRLIAEQYGLKFNIEFIELEKEQLPPWEEPLPQQQVSAPEK
PAPKKESKPEKKETAPKKAKTYTAQPPEWLKFDPSSAVCVLGREIKKPPVRLDSVTLESG
RVVVCGDVFTFDSRETRDGSKYIITFNITDYTSSNTVKVIQDKKKAEPLLEAVKNGVTVL
VCGDVSYDKYDREIAIRALDISTVKKIDDRTDNAPQKRVELHLHTTMSSMDAVTPAAEYI
KRAAAWGHKAIAITDHGVAQAFPDAMNAREELEKSGKEIKVIYGIENYFVDDMAPAVFGE
DDTPFDGEFIAFDLETTGLSREKDRITEIGAVRIKGGEIVEEFDTFVNPGRHIPENITQL
TGIDDEMVKDAPSDKEAVEKFFEFCGNAPLVAHNAAFDAGFIRAALERNGIKRDFTYIDS
IPICRTLYPELKSYRLNIVAKYLKLPPFNHHRACDDARELGEIFKILLTELEQKRGVKSV
KDINGALCGEDVKKMRSYHQILLVKNAVGLKNLYKLISKSHLDYFYKKPKIPRSLLMQYR
EGLLVGSACEAGEVFRAILDGKPENELRKIASFYDFLEIQPLGNNAFLLREGRVKDEKAL
QDINRTIVRLGEELGKPVVATGDVHFIDEKDKVFREILMTGQGYTDADNQPPLYFRTTEE
MLKEFEYLGPEKAYEVVVTNPNKIADMIEQVRPIPKGNYPPSLEGADEELQRITWNKAKE
IYGDPLPDIVKNRLQRELDSIIKHGFAVLYMIAQKLVAKSESDGYLVGSRGSVGSSFVAT
MSGITEVNPLPPHYVCPKCKYSEFITDGSVGSGFDLPEKMCPKCGEKLEGNGHDIPFETF
LGFDGDKSPDIDLNFSGEEQPTAHKYTEVLFGKGHVFRAGTIASVAEKTAYGFVLKFLEQ
KGKVLHKAEELRLAKGCTGVKRTTGQHPGGMIVVPRDYEIYDFTPVQHPADDPDSDIITT
HFDFNSLHDTILKLDILGHDVPTLYKHLEDLTGIDVMSVPMNDPKVMKLFTSTEPLGVTP
EEIGSETGTLSLPEMGTKFVRQMLIESQPKTFSDLLQISGLSHGTDVWIGNAQELIKNGI
CTISEVVGTRDSIMTYLMHKGVEPKHAFKIMEIVRKGRAPKLLTEEYINEMKEHNVPQWY
IDSCMKIKYMFPKAHAAAYVIAAIRLGWYKVYRPLEYYAAYFTVRGGDFDASIVLGGKEQ
VKAKMNEIINKGKEATAKELDLFTTLEIVNEAYARGISFLPVDIYKSDATKFLVEDGKIR
VPLNSLKGLGDSVAKSIAAAREKGPFISQDDLSARGGASKSVIEMLEQAGALGDLPKTSQ
ITFF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcaagagcattcctcaaatcttcgtcaaggcagcaccgaaaggtgaaaca
gcagagattctcaacaatacaaagattctcgagatgtcgatctcccgcgaggacaggcag
atagacgttaccgcagagtttgacaaaataatccctttttcgctcctccatcaatatgaa
attgatgtggcaaaggcctatggccttaatgcaataaaaatatatccgcgatatgacagc
tcgcttttctgtgaacggagcttttttgaagttatcgaacagcttaaagcgtctatcgcc
acaataaacggtttcttcaacggcagcgaatgtgaagctgacggcgatatcttgcgcata
aaattaaaaaacggcggcgccgatatactgaaatcgtcccactgtgacagcgagatatcg
cgtcttattgcggaacagtacggactgaaatttaatatagaatttattgagctggaaaaa
gagcaactgccaccgtgggaggagccgctgccccaacagcaggtttccgccccagaaaaa
ccggcgccgaaaaaggaaagcaaaccagaaaagaaggaaacagcgccgaaaaaagcgaaa
acctatactgcgcagccacctgagtggctcaagttcgacccttcaagcgcggtatgcgtt
ttggggcgcgaaatcaaaaagcctcctgtaaggctcgacagtgtaacgcttgagtcaggg
cgggtggtcgtctgcggtgatgtttttacatttgattcaagagaaacacgcgacggctca
aaatacataatcactttcaatataaccgattacacctcttcaaatacggtaaaagttata
caggataagaaaaaggccgaaccgctgctcgaggcggtaaagaacggcgttactgtactt
gtctgcggcgacgtttcctatgacaagtacgaccgcgaaatagcgatccgtgcgctggat
atttccactgtcaaaaagatcgatgacagaaccgataacgcacctcaaaagcgtgtcgaa
ctccacctgcatactacaatgtcttctatggacgctgtaaccccagcggcagagtatatt
aaacgtgcggctgcatggggtcacaaggctattgccataacagaccacggcgtggcgcag
gcgttcccggatgccatgaatgcccgggaagaactcgaaaagtccggcaaggaaatcaaa
gtcatttacgggattgagaattattttgtcgatgacatggcgccggctgtatttggtgag
gacgacacgccgttcgatggagaattcatagcttttgaccttgagacgacagggctttcc
cgtgagaaagaccgcataaccgaaataggcgcagtccgcataaaaggcggggaaattgtt
gaggaattcgacaccttcgtaaatcccggccgccatatacctgaaaacataacacaactc
accggcattgacgacgagatggtaaaagacgccccctctgacaaagaggcggtcgaaaaa
tttttcgagttctgcggcaacgcgcctttggtggcacacaatgcggcatttgacgcagga
tttatccgcgcggccctcgaaagaaacggcataaagcgtgattttacctatatagattca
atcccgatatgccgcacgctctatccagaactgaaaagctacaggctcaatatagtcgca
aaatacttaaaactgccgccgttcaatcatcacagagcctgtgacgacgcaagggaactc
ggcgagattttcaaaattctgctcactgaacttgaacaaaagcgcggcgtaaaatcagta
aaggatataaacggggcattatgcggcgaagatgtcaaaaaaatgcgctcatatcatcag
attctgctggtgaaaaacgccgtcgggcttaaaaacctttacaagcttatctcaaaaagc
catctcgactatttttataaaaagcctaagattccgcgcagcctgcttatgcagtaccgc
gagggactgctggtcggcagcgcctgcgaagcgggcgaagtcttccgcgccatactggac
ggaaagcctgaaaacgagctgcgcaaaatcgcctctttctatgattttcttgaaatacag
cccctcggaaacaatgcctttttgctccgtgagggcagggtcaaagacgaaaaggcgctt
caagatataaaccgcacgattgtaaggctcggcgaagagctgggcaagcctgtcgtagcg
acgggcgacgttcactttattgatgaaaaggacaaggtattccgcgaaattctgatgacg
ggccagggttatactgacgcggacaatcagcctcccctttatttccgcaccacagaggaa
atgctcaaggaatttgagtacctcgggccggaaaaggcatatgaggttgttgttacaaac
ccgaacaaaatcgctgatatgatagaacaggtgcgcccgataccaaagggcaactatcct
ccatcccttgaaggggctgacgaagagcttcagcggataacatggaacaaggcaaaggaa
atctacggcgacccgcttccggatatcgtgaaaaaccggctccaaagagagcttgactcc
atcatcaagcatggcttcgctgtactttacatgattgcgcagaaacttgtcgcaaaatcc
gagagcgacggataccttgtcggctcccgtggttccgtcggttcctcctttgtcgcgacc
atgtccggcataacggaagtcaatcccctgccgccgcattatgtctgcccaaaatgcaaa
tacagcgaattcatcacggacggcagcgtcggcagcggcttcgacctgccggaaaagatg
tgccctaaatgcggcgaaaagctggaaggcaacgggcacgatataccttttgagaccttc
ctcgggttcgacggcgacaagtcccctgatatcgaccttaacttctccggtgaggaacag
ccgaccgctcacaaatacaccgaagtgcttttcggcaagggacatgttttccgcgccgga
acaatagcctctgtcgccgaaaaaaccgcctatggcttcgtcctgaagttccttgagcag
aagggcaaagtgctccacaaggcggaggagctgcggcttgcaaaaggctgcaccggcgtc
aagcggactactggccagcacccgggcggcatgattgtcgtgccgcgggattacgagata
tatgactttacacctgtccagcaccccgctgacgacccggattcagatattattacaacg
cacttcgacttcaactctctgcatgacacaatcctgaagctcgatattctcggccatgat
gtgccgacgctttacaagcaccttgaggatttgacaggcattgacgttatgtctgttcct
atgaacgaccccaaggtaatgaagctgtttacctcaaccgagcccctcggggtaaccccg
gaggaaataggcagcgagaccggcacgctttcgctgcctgagatgggcacaaaattcgtg
cgccagatgcttattgaatcacagcccaagaccttctccgacttgcttcagatatcagga
ctttcgcacggcacagatgtatggatcggcaacgcgcaggagcttatcaaaaacggcatc
tgcacaatatccgaggttgtcggaacgcgtgacagcataatgacatatctgatgcacaaa
ggcgttgagccaaagcacgcatttaaaatcatggaaatagtgcgtaagggccgcgcgccg
aaactgctgaccgaggaatatatcaatgaaatgaaggaacacaatgtaccccagtggtat
atcgactcctgcatgaagataaaatatatgttcccgaaggcacacgctgccgcttatgtc
atcgcggccatacggctcggctggtacaaagtctatcgccccctcgaatactatgccgcg
tatttcaccgtccgcggtggcgattttgacgcaagtattgtgctgggcggcaaagaacag
gtcaaggccaagatgaacgagattataaacaagggcaaagaagcaacggcgaaggagctt
gacctcttcaccaccctcgaaattgtaaacgaggcttatgcccgcggcataagtttcctg
cccgtcgatatatacaagtctgacgcgacaaaattccttgtggaggacggaaaaatccgc
gtaccgctcaattcgctcaaagggctgggtgacagcgtcgcaaaaagtattgcggcggca
cgcgaaaaaggcccgtttatctcacaggatgacttatcagcccgcggcggggcgtcaaag
agcgtcatcgaaatgctggaacaggcaggcgccctcggagatttgcccaaaacaagccag
attacgtttttctga
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integrated database retrieval system