KEGG   Clostridium cellulosi: CCDG5_0213
Entry
CCDG5_0213        CDS       T03806                                 
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
ccel  Clostridium cellulosi
Pathway
ccel03030  DNA replication
ccel03430  Mismatch repair
ccel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CCDG5_0213 (polC)
   03430 Mismatch repair
    CCDG5_0213 (polC)
   03440 Homologous recombination
    CCDG5_0213 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccel03032]
    CCDG5_0213 (polC)
   03400 DNA repair and recombination proteins [BR:ccel03400]
    CCDG5_0213 (polC)
Enzymes [BR:ccel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CCDG5_0213 (polC)
DNA replication proteins [BR:ccel03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CCDG5_0213 (polC)
DNA repair and recombination proteins [BR:ccel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CCDG5_0213 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 Rv2179c-like DNA_pol3_a_NII RNase_H_2 tRNA_anti-codon DNA_pol3_a_NI HHH_3 YhfH POT1 TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: CDZ23356
UniProt: A0A078KIJ4
LinkDB
Position
I:complement(220691..225025)
AA seq 1444 aa
MAESKSIPQIFVKAAPKGETAEILNNTKILEMSISREDRQIDVTAEFDKIIPFSLLHQYE
IDVAKAYGLNAIKIYPRYDSSLFCERSFFEVIEQLKASIATINGFFNGSECEADGDILRI
KLKNGGADILKSSHCDSEISRLIAEQYGLKFNIEFIELEKEQLPPWEEPLPQQQVSAPEK
PAPKKESKPEKKETAPKKAKTYTAQPPEWLKFDPSSAVCVLGREIKKPPVRLDSVTLESG
RVVVCGDVFTFDSRETRDGSKYIITFNITDYTSSNTVKVIQDKKKAEPLLEAVKNGVTVL
VCGDVSYDKYDREIAIRALDISTVKKIDDRTDNAPQKRVELHLHTTMSSMDAVTPAAEYI
KRAAAWGHKAIAITDHGVAQAFPDAMNAREELEKSGKEIKVIYGIENYFVDDMAPAVFGE
DDTPFDGEFIAFDLETTGLSREKDRITEIGAVRIKGGEIVEEFDTFVNPGRHIPENITQL
TGIDDEMVKDAPSDKEAVEKFFEFCGNAPLVAHNAAFDAGFIRAALERNGIKRDFTYIDS
IPICRTLYPELKSYRLNIVAKYLKLPPFNHHRACDDARELGEIFKILLTELEQKRGVKSV
KDINGALCGEDVKKMRSYHQILLVKNAVGLKNLYKLISKSHLDYFYKKPKIPRSLLMQYR
EGLLVGSACEAGEVFRAILDGKPENELRKIASFYDFLEIQPLGNNAFLLREGRVKDEKAL
QDINRTIVRLGEELGKPVVATGDVHFIDEKDKVFREILMTGQGYTDADNQPPLYFRTTEE
MLKEFEYLGPEKAYEVVVTNPNKIADMIEQVRPIPKGNYPPSLEGADEELQRITWNKAKE
IYGDPLPDIVKNRLQRELDSIIKHGFAVLYMIAQKLVAKSESDGYLVGSRGSVGSSFVAT
MSGITEVNPLPPHYVCPKCKYSEFITDGSVGSGFDLPEKMCPKCGEKLEGNGHDIPFETF
LGFDGDKSPDIDLNFSGEEQPTAHKYTEVLFGKGHVFRAGTIASVAEKTAYGFVLKFLEQ
KGKVLHKAEELRLAKGCTGVKRTTGQHPGGMIVVPRDYEIYDFTPVQHPADDPDSDIITT
HFDFNSLHDTILKLDILGHDVPTLYKHLEDLTGIDVMSVPMNDPKVMKLFTSTEPLGVTP
EEIGSETGTLSLPEMGTKFVRQMLIESQPKTFSDLLQISGLSHGTDVWIGNAQELIKNGI
CTISEVVGTRDSIMTYLMHKGVEPKHAFKIMEIVRKGRAPKLLTEEYINEMKEHNVPQWY
IDSCMKIKYMFPKAHAAAYVIAAIRLGWYKVYRPLEYYAAYFTVRGGDFDASIVLGGKEQ
VKAKMNEIINKGKEATAKELDLFTTLEIVNEAYARGISFLPVDIYKSDATKFLVEDGKIR
VPLNSLKGLGDSVAKSIAAAREKGPFISQDDLSARGGASKSVIEMLEQAGALGDLPKTSQ
ITFF
NT seq 4335 nt   +upstreamnt  +downstreamnt
atggcggaaagcaagagcattcctcaaatcttcgtcaaggcagcaccgaaaggtgaaaca
gcagagattctcaacaatacaaagattctcgagatgtcgatctcccgcgaggacaggcag
atagacgttaccgcagagtttgacaaaataatccctttttcgctcctccatcaatatgaa
attgatgtggcaaaggcctatggccttaatgcaataaaaatatatccgcgatatgacagc
tcgcttttctgtgaacggagcttttttgaagttatcgaacagcttaaagcgtctatcgcc
acaataaacggtttcttcaacggcagcgaatgtgaagctgacggcgatatcttgcgcata
aaattaaaaaacggcggcgccgatatactgaaatcgtcccactgtgacagcgagatatcg
cgtcttattgcggaacagtacggactgaaatttaatatagaatttattgagctggaaaaa
gagcaactgccaccgtgggaggagccgctgccccaacagcaggtttccgccccagaaaaa
ccggcgccgaaaaaggaaagcaaaccagaaaagaaggaaacagcgccgaaaaaagcgaaa
acctatactgcgcagccacctgagtggctcaagttcgacccttcaagcgcggtatgcgtt
ttggggcgcgaaatcaaaaagcctcctgtaaggctcgacagtgtaacgcttgagtcaggg
cgggtggtcgtctgcggtgatgtttttacatttgattcaagagaaacacgcgacggctca
aaatacataatcactttcaatataaccgattacacctcttcaaatacggtaaaagttata
caggataagaaaaaggccgaaccgctgctcgaggcggtaaagaacggcgttactgtactt
gtctgcggcgacgtttcctatgacaagtacgaccgcgaaatagcgatccgtgcgctggat
atttccactgtcaaaaagatcgatgacagaaccgataacgcacctcaaaagcgtgtcgaa
ctccacctgcatactacaatgtcttctatggacgctgtaaccccagcggcagagtatatt
aaacgtgcggctgcatggggtcacaaggctattgccataacagaccacggcgtggcgcag
gcgttcccggatgccatgaatgcccgggaagaactcgaaaagtccggcaaggaaatcaaa
gtcatttacgggattgagaattattttgtcgatgacatggcgccggctgtatttggtgag
gacgacacgccgttcgatggagaattcatagcttttgaccttgagacgacagggctttcc
cgtgagaaagaccgcataaccgaaataggcgcagtccgcataaaaggcggggaaattgtt
gaggaattcgacaccttcgtaaatcccggccgccatatacctgaaaacataacacaactc
accggcattgacgacgagatggtaaaagacgccccctctgacaaagaggcggtcgaaaaa
tttttcgagttctgcggcaacgcgcctttggtggcacacaatgcggcatttgacgcagga
tttatccgcgcggccctcgaaagaaacggcataaagcgtgattttacctatatagattca
atcccgatatgccgcacgctctatccagaactgaaaagctacaggctcaatatagtcgca
aaatacttaaaactgccgccgttcaatcatcacagagcctgtgacgacgcaagggaactc
ggcgagattttcaaaattctgctcactgaacttgaacaaaagcgcggcgtaaaatcagta
aaggatataaacggggcattatgcggcgaagatgtcaaaaaaatgcgctcatatcatcag
attctgctggtgaaaaacgccgtcgggcttaaaaacctttacaagcttatctcaaaaagc
catctcgactatttttataaaaagcctaagattccgcgcagcctgcttatgcagtaccgc
gagggactgctggtcggcagcgcctgcgaagcgggcgaagtcttccgcgccatactggac
ggaaagcctgaaaacgagctgcgcaaaatcgcctctttctatgattttcttgaaatacag
cccctcggaaacaatgcctttttgctccgtgagggcagggtcaaagacgaaaaggcgctt
caagatataaaccgcacgattgtaaggctcggcgaagagctgggcaagcctgtcgtagcg
acgggcgacgttcactttattgatgaaaaggacaaggtattccgcgaaattctgatgacg
ggccagggttatactgacgcggacaatcagcctcccctttatttccgcaccacagaggaa
atgctcaaggaatttgagtacctcgggccggaaaaggcatatgaggttgttgttacaaac
ccgaacaaaatcgctgatatgatagaacaggtgcgcccgataccaaagggcaactatcct
ccatcccttgaaggggctgacgaagagcttcagcggataacatggaacaaggcaaaggaa
atctacggcgacccgcttccggatatcgtgaaaaaccggctccaaagagagcttgactcc
atcatcaagcatggcttcgctgtactttacatgattgcgcagaaacttgtcgcaaaatcc
gagagcgacggataccttgtcggctcccgtggttccgtcggttcctcctttgtcgcgacc
atgtccggcataacggaagtcaatcccctgccgccgcattatgtctgcccaaaatgcaaa
tacagcgaattcatcacggacggcagcgtcggcagcggcttcgacctgccggaaaagatg
tgccctaaatgcggcgaaaagctggaaggcaacgggcacgatataccttttgagaccttc
ctcgggttcgacggcgacaagtcccctgatatcgaccttaacttctccggtgaggaacag
ccgaccgctcacaaatacaccgaagtgcttttcggcaagggacatgttttccgcgccgga
acaatagcctctgtcgccgaaaaaaccgcctatggcttcgtcctgaagttccttgagcag
aagggcaaagtgctccacaaggcggaggagctgcggcttgcaaaaggctgcaccggcgtc
aagcggactactggccagcacccgggcggcatgattgtcgtgccgcgggattacgagata
tatgactttacacctgtccagcaccccgctgacgacccggattcagatattattacaacg
cacttcgacttcaactctctgcatgacacaatcctgaagctcgatattctcggccatgat
gtgccgacgctttacaagcaccttgaggatttgacaggcattgacgttatgtctgttcct
atgaacgaccccaaggtaatgaagctgtttacctcaaccgagcccctcggggtaaccccg
gaggaaataggcagcgagaccggcacgctttcgctgcctgagatgggcacaaaattcgtg
cgccagatgcttattgaatcacagcccaagaccttctccgacttgcttcagatatcagga
ctttcgcacggcacagatgtatggatcggcaacgcgcaggagcttatcaaaaacggcatc
tgcacaatatccgaggttgtcggaacgcgtgacagcataatgacatatctgatgcacaaa
ggcgttgagccaaagcacgcatttaaaatcatggaaatagtgcgtaagggccgcgcgccg
aaactgctgaccgaggaatatatcaatgaaatgaaggaacacaatgtaccccagtggtat
atcgactcctgcatgaagataaaatatatgttcccgaaggcacacgctgccgcttatgtc
atcgcggccatacggctcggctggtacaaagtctatcgccccctcgaatactatgccgcg
tatttcaccgtccgcggtggcgattttgacgcaagtattgtgctgggcggcaaagaacag
gtcaaggccaagatgaacgagattataaacaagggcaaagaagcaacggcgaaggagctt
gacctcttcaccaccctcgaaattgtaaacgaggcttatgcccgcggcataagtttcctg
cccgtcgatatatacaagtctgacgcgacaaaattccttgtggaggacggaaaaatccgc
gtaccgctcaattcgctcaaagggctgggtgacagcgtcgcaaaaagtattgcggcggca
cgcgaaaaaggcccgtttatctcacaggatgacttatcagcccgcggcggggcgtcaaag
agcgtcatcgaaatgctggaacaggcaggcgccctcggagatttgcccaaaacaagccag
attacgtttttctga

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