Clostridium cellulosi: CCDG5_0464
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Entry
CCDG5_0464 CDS
T03806
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccel
Clostridium cellulosi
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccel03032
]
CCDG5_0464 (topA)
03400 DNA repair and recombination proteins [BR:
ccel03400
]
CCDG5_0464 (topA)
Enzymes [BR:
ccel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCDG5_0464 (topA)
DNA replication proteins [BR:
ccel03032
]
Prokaryotic type
DNA Topoisomerases
CCDG5_0464 (topA)
DNA repair and recombination proteins [BR:
ccel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCDG5_0464 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DNA_ligase_ZBD
Toprim_4
Auto_anti-p27
Toprim_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
CDZ23602
UniProt:
A0A078KM54
LinkDB
All DBs
Position
I:491754..493832
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AA seq
692 aa
AA seq
DB search
MSDLVIVESPTKADTIKKYLGRGYNVIASMGHVRDLPKSRMGVDLDNGFTPEYISIRGKA
ALIKMLKKEAKQSKRIYLATDPDREGEAISWHLSKILGIDEDAPVRVTFNEITKTAVKEG
IKHPRSIDLNLVNAQQARRILDRIVGYSLSPFLWKKVKRGLSAGRVQSVAVRMIVDREEE
IRAFQPQEYWTIEAKDLTTKNSKKTFDAKFFGDKNGKIEIKTKEQADAILEKVKEAEFAV
VSVKKSERKRSPAPPFTTSTLQQEASKRLNFQSKKTMQIAQELYEGVKIKDYGAIGLITY
MRTDSLRIADEARENAAKFIEQHYGKEYLPEKPRVYKTKKGSQDAHEAIRPTVQELTPEK
VKDSLTKDQYKLYKLIWERFTASQMANEVFDTVSADIDADGYVFKAAGSTIKFKGFAAVY
EEADTEATGKPLPALQEGDILNKGEIEASQHFTQPPARYTEASLIKTLEENGIGRPSTYA
PTITTILARGYVTRENRQLVPTPLGEVTTKLMKENFADIVSVEFTAKMEEDLDKIEEGGQ
NWVDTLSNFYNGFKNTLKTAEEVLGDVHVKVPDEESDVICENCGRRMVIKMGKYGKFLAC
PGYPECKNTKPLVQETGALCPACGGKVLQKKSKNGKTYYGCENNPKCPFMTWDVPQQQKC
PKCGSNLFKKRGGVLHCLKEGCGYEQERGTDK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttggtaatagttgagtcacccacaaaggcggatacaataaaaaaatatctc
ggaagaggttataatgtcatagcttcaatgggacatgtccgagacctgccaaaaagccgc
atgggtgtagacttagacaatggtttcacgccagaatacatttcaataaggggcaaagcc
gcccttataaaaatgcttaaaaaggaagcaaaacaaagcaaaagaatttatctcgcaaca
gaccccgaccgcgaaggagaagcaataagctggcacctgtcaaagatactcggtatcgac
gaagacgcgccggttcgggttacattcaatgagatcacaaaaaccgctgtcaaagaggga
ataaaacacccgcgcagcattgacctcaaccttgtaaacgcacagcaggccagaagaatc
cttgaccgcattgttggttacagcttaagcccattcctgtggaaaaaggtaaaacgcggg
ctttctgccggccgagtccagtctgtcgcggtgcgtatgatagtcgacagggaagaagag
ataagggctttccagccgcaggaatactggaccatagaggccaaagacctaactacaaag
aattcaaaaaaaacctttgacgcaaaatttttcggagacaaaaacgggaaaattgagata
aagacaaaagaacaggctgacgccatacttgaaaaggtaaaagaagcggagtttgcggtt
gtgtctgttaagaagagtgaacgcaaacgctcgcccgcccctccttttaccacctcaacc
cttcagcaggaagcgtccaaacgccttaattttcagtcaaagaaaactatgcagatcgcg
caggagctgtatgaaggtgttaaaataaaggactacggtgcaataggccttatcacctat
atgagaaccgactcgctgcgtattgctgatgaggcgcgggaaaacgcggcaaagttcatt
gagcagcattacggcaaggaatacctgccggaaaaaccgcgcgtttataagacgaaaaag
ggctctcaggacgcacatgaggctatccgcccgactgtgcaggaactgactccagagaag
gtcaaagacagcctcacaaaagaccagtataaactctataagctcatctgggagcgcttt
acggcgagtcagatggcaaacgaggtttttgacacagtgtccgccgatattgacgcggac
ggctatgtattcaaagcggccggcagcaccattaagttcaagggctttgccgccgtttat
gaagaagctgatacggaagccacaggcaaaccgttgcccgcattgcaagagggcgatata
ctcaataaaggcgaaattgaggcgagccagcatttcacccagccgcctgcacgttatacc
gaggcgtcgcttataaagacgcttgaggaaaacggcataggcaggccgagcacatatgcc
ccgaccatcacgactatacttgccaggggatatgtcacaagagagaaccgccagcttgtg
ccgactccactcggcgaggttacgacaaagctgatgaaagagaattttgcggacatcgtc
agcgttgagtttacggcaaagatggaggaagaccttgacaagatagaagagggaggacaa
aactgggttgatacgctgagcaatttctacaacggttttaagaatacgcttaagaccgcc
gaagaagtgctcggtgacgtacatgtaaaggtgccggacgaggaatcagacgtaatctgt
gagaactgcgggcgccgtatggtaattaagatgggcaaatacggcaaattccttgcatgt
cccggatatcctgaatgtaaaaatacaaagcctttagtccaggaaacaggggcattatgc
cctgcctgcggcggaaaagtcctgcaaaagaaatcgaagaacggcaagacttattacggc
tgtgaaaacaacccgaaatgtccgtttatgacatgggatgtgccgcagcagcagaaatgt
cctaaatgcgggtcaaacctgttcaaaaaacgcggcggggtactgcattgtcttaaagaa
ggctgcggatatgaacaggaaaggggaacagataagtga
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