Clostridium cellulosi: CCDG5_0908
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Entry
CCDG5_0908 CDS
T03806
Symbol
groL3
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCDG5_0908 (groL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccel03019
]
CCDG5_0908 (groL3)
03110 Chaperones and folding catalysts [BR:
ccel03110
]
CCDG5_0908 (groL3)
03029 Mitochondrial biogenesis [BR:
ccel03029
]
CCDG5_0908 (groL3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccel04147
]
CCDG5_0908 (groL3)
Enzymes [BR:
ccel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CCDG5_0908 (groL3)
Messenger RNA biogenesis [BR:
ccel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CCDG5_0908 (groL3)
Chaperones and folding catalysts [BR:
ccel03110
]
Heat shock proteins
HSP60 / Chaperonin
CCDG5_0908 (groL3)
Mitochondrial biogenesis [BR:
ccel03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CCDG5_0908 (groL3)
Exosome [BR:
ccel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CCDG5_0908 (groL3)
Exosomal proteins of other body fluids (saliva and urine)
CCDG5_0908 (groL3)
Exosomal proteins of breast cancer cells
CCDG5_0908 (groL3)
Exosomal proteins of colorectal cancer cells
CCDG5_0908 (groL3)
Exosomal proteins of bladder cancer cells
CCDG5_0908 (groL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CDZ24027
UniProt:
A0A078KNE1
LinkDB
All DBs
Position
I:980048..981673
Genome browser
AA seq
541 aa
AA seq
DB search
MKMAKMIAFDEDARKSMLAGVDKLANAVKITLGPKGRNVVLERKYGSPIITNDGVTIAKE
IELENPYENMGAQLVKEVASKTNDVAGDGTTTATLLAQTIVHNGLKNVASGSNPIALKRG
IDKAVAKAVESIKNSSRKIKGREDIEFVASISSEDPQIGRFLADAMEKVSSDGVITIEES
KTSETYIETVEGMQFDHGYISPYMVTDKEKMTAELEDPYILITDKKISNAQELLPALEII
VKKGAKLLIIAEDVDGDALATLIVNKLRGTFTCVAVKAPGYGDRRKEMLQDIAILTGGQV
ISSDMGMNLQDIKEDWFGKAKSVKVDKENTTIIDGLGDKQAIQDRIKSIKHQIETSTSDY
DKEKLNERMAKLSGGVAVIRVGAATETEMKEKKYRVEDALNATKAAVEEGIIPGGGTAFI
NAIPDVQKLADSLEGDEKTGAYIIVRALEEPLRQIAANAGVDPSVVVEKVRNSEKSIGYD
AAKEEYVDMFKSGIIDPVKVTRFALQNAASVAGMILTTESTVADKPEKKQPAPAPNPDMD
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatggctaagatgatagcgtttgatgaagatgcaagaaagtcaatgcttgcaggt
gttgacaaactggccaatgcggtcaagattacgttgggcccgaaaggacgcaatgtcgta
cttgagagaaaatatggctcaccaataatcacaaacgacggtgttacgatagcaaaggaa
atcgagttggaaaatccatatgagaatatgggagcccagcttgtaaaggaagttgccagc
aaaaccaatgatgtcgccggtgatggcacaaccactgctacacttttggcacagactatt
gttcacaatggcctgaagaatgttgcttctggttctaatccgatagcgctcaagcgcggt
atagacaaggcagttgccaaagccgtcgaaagcatcaaaaacagcagccgcaaaatcaaa
ggacgcgaggacattgaatttgtcgcatccatttcctctgaagatccgcagattgggcgt
tttttggcggatgcaatggagaaagtttcttcagacggtgttatcactatagaagaatcc
aaaacatcagaaacctatatcgaaacggtcgaaggaatgcagttcgaccacggctatatt
tctccctacatggtgacagataaggaaaaaatgacggcggagctggaggatccgtatata
ctcattactgacaagaagatcagcaatgcacaagaactcctaccggccctcgaaattatc
gtaaagaagggcgcaaagcttctgattattgccgaggatgtagatggtgatgcactggcc
acattgatagtcaacaaactccgcggtacattcacatgcgtagcggtgaaggcgcccgga
tacggtgaccgtcgaaaagaaatgcttcaggatattgcaatactgaccggcggtcaggta
atatccagcgatatgggcatgaaccttcaggatatcaaggaagactggttcggcaaagca
aaatcagttaaggttgacaaagagaacacaaccattattgacggtttgggcgataagcag
gcaatacaggaccgcataaaatccataaaacatcagattgaaacaagcacctccgattat
gataaagagaagctcaacgagcgcatggcaaagctcagcggcggtgtagccgttatccgc
gttggcgccgcaaccgagacagaaatgaaagaaaagaaataccgcgtcgaagatgcattg
aatgctactaaggctgctgttgaggaaggtattattccaggcggtggtactgcgtttatc
aatgcgataccggatgtccagaagcttgcggattcacttgaaggggatgaaaagaccggc
gcttacattattgtacgtgcgctggaagagccgcttcgccagatcgcagcgaatgcaggt
gttgacccctcagtcgtggtcgaaaaggtccgcaacagcgaaaagagcatcggctatgat
gcagcaaaagaagaatatgtcgatatgtttaaatccggtattattgaccctgtaaaagtt
acaaggtttgcacttcaaaatgctgcatcagtagcgggtatgattcttacgaccgaaagt
acggttgctgacaagcctgaaaagaagcaaccggcaccggctccaaacccggatatggat
tattaa
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