KEGG   Clostridium cellulosi: CCDG5_1020
Entry
CCDG5_1020        CDS       T03806                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ccel  Clostridium cellulosi
Pathway
ccel03420  Nucleotide excision repair
ccel03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CCDG5_1020
   03430 Mismatch repair
    CCDG5_1020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccel03400]
    CCDG5_1020
Enzymes [BR:ccel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CCDG5_1020
DNA repair and recombination proteins [BR:ccel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CCDG5_1020
   MMR (mismatch excision repair)
    Other MMR factors
     CCDG5_1020
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30
Other DBs
NCBI-ProteinID: CDZ24137
UniProt: A0A078KNM4
LinkDB
Position
I:1108027..1110396
AA seq 789 aa
MPENINTEFIKLRKEIMEADFSRLNDMQRQAVFHTKGPLLILAGAGSGKTTVLVNRIACI
LKYGNAYESEKIEYDVNNETLDYLRDCLKNKRFSEERLSRLLSVGKVPAWSVMAITFTNK
AANELKERLSSMLGDDARDIWACTFHSACSRILRRDIDKLDMGYTGSFTIYDTDDSVKLI
RQFVKDVKDEKSFASKVVLPTISRAKEKCLDPKEFASISSNDSRMDMIAKIYEKYQQALR
RANALDFDDMIMLTVKLFEKRPDVLEYYQHRFKYILVDEYQDTNHAQYRLVSLLADKHRN
ICVVGDDDQSIYRFRGATIENILSFEKQYPDAKVIKLEQNYRSTSTILNAANEVIANNKG
RKGKILWTKNGTGEKIDINEFEDESSESQYISNSILENVKNGAKFSDHAILYRMNAQSGA
IEKALVSRGIPYRIIGGFRFYERMEIKDILAYLCVINNKDDDLHFERIVNVPKRGIGNAT
LEAAHEISDRYGISLYEVFKRCDEFECFSRKAVKIKSLINFFEEMRSASKVIAPHELITE
VIEKSGYLAELESDKSSDSEERIQNLNTLISNAADYEKNQDEPTLSGFLEETSLMTDLDN
YDENADTVVLMTVHSAKGLEFPIVYIAGMEDGIFPNQAALSFPEEMEEERRLAYVAITRA
KEKLNFSYARSRMIFGKTVYHRRSRFIDEIPEIYVNEHTSSREQIFNAFKPAKGQFGKQT
IQTGGLGIGQKAAHTEEKYQAGDIVVHDTFGKGIVLSAKAMGNDMLLEIAFERFGTKKIM
ANFAKLKRA
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgccggagaatataaatacagagttcattaaattgcgtaaagaaattatggaagcggat
ttttcaagattgaatgatatgcagcgccaagctgtatttcatacgaaaggtccgctgttg
attttggcaggtgcaggcagcggaaaaacaactgtgcttgttaatagaattgcttgtatt
ttaaaatatggcaacgcttatgaaagcgaaaaaatagaatatgacgtcaataacgaaacg
cttgattatctgcgagactgccttaaaaataaacgcttttccgaagaacgcctgagccgt
ctgctttccgtcgggaaagtacccgcatggagtgtaatggctattacctttacaaataaa
gcagcaaacgagctcaaagaaagattatcctcaatgctgggggatgatgcccgggatata
tgggcatgcacattccattctgcctgctcacggatacttcgccgcgacatagacaaactt
gatatgggctatacaggctcgttcacaatttatgatactgatgattcagtcaagttgatc
cgtcaatttgtaaaagacgtgaaagatgagaaaagttttgcctcaaaggttgtcctaccg
acaatcagccgtgcaaaagagaagtgccttgacccaaaagaatttgcgagtatctcttca
aacgattcccgcatggatatgatagcaaagatatatgaaaaatatcagcaggcgttaagg
cgcgcaaacgctcttgatttcgatgatatgataatgctgacagttaagctctttgaaaaa
agaccggatgtacttgaatattatcagcacagattcaagtacatacttgtcgacgaatat
caggacacaaatcatgcccaatacaggcttgtcagcctgcttgccgacaaacaccgcaat
atctgcgttgtcggtgacgatgaccagagtatctatcgttttcgtggtgcgacgatcgag
aatatcctgagttttgaaaaacagtacccggatgcgaaagttataaaactagagcaaaac
tatcgttcgacctcaacaatattgaatgctgcaaatgaagtaatcgcaaacaataagggc
agaaaaggcaagattttatggaccaagaacgggacaggagaaaaaatagatattaacgaa
ttcgaggatgaatcctctgaatcgcaatatatatcaaattccatactcgaaaacgtgaaa
aacggcgccaaattttccgaccatgctattctttaccgcatgaacgcacagtctggtgcg
attgagaaggcccttgtaagccgcggtattccgtaccgaatcataggcggtttcaggttt
tatgagcgcatggagataaaagatattctcgcgtatctttgcgttataaataacaaagat
gacgacctgcattttgagcgcatagtaaatgtgccaaagcgcggcataggcaacgcaaca
cttgaggctgcgcatgaaatttctgatagatacggtatcagtctttatgaggtatttaaa
cgctgcgatgagtttgaatgtttctcgagaaaagcggtaaaaataaaaagccttattaac
ttttttgaggaaatgcgctcagcttcaaaagtgattgcacctcatgagttgataacggag
gtaattgaaaagagcggatatctggctgaactggaatccgataaaagcagcgattctgag
gaacgaatacagaacctcaatacgctgatatcaaacgctgccgattatgaaaagaatcag
gatgagccaacactttcaggatttctggaagaaacatcattaatgaccgaccttgataat
tacgacgagaatgcagatacagtcgtactaatgacagtacattcggccaagggactggaa
ttcccgatagtttacattgcaggcatggaagacggtatattcccaaatcaggcggcactt
tctttcccggaagaaatggaggaggaaaggcggcttgcatatgttgccataaccagggca
aaagaaaaactgaacttttcgtatgcaagaagtcgtatgatttttgggaaaaccgtttat
caccgccgttcaaggtttattgacgagataccagagatttatgttaatgagcatacaagc
agccgtgagcagatttttaacgcttttaaacctgccaaaggacaatttggaaagcaaaca
attcagacaggcggtttaggaatagggcaaaaagctgctcacactgaggaaaagtatcaa
gcaggagatatcgttgtgcatgatacctttggaaagggaattgttctctcagccaaagcg
atgggcaacgatatgctgcttgaaattgcttttgaacggttcggcactaaaaagattatg
gcgaacttcgcaaaacttaagagagcgtaa

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