Clostridium cellulosi: CCDG5_1093
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Entry
CCDG5_1093 CDS
T03806
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ccel
Clostridium cellulosi
Pathway
ccel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCDG5_1093 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccel03400
]
CCDG5_1093 (uvrB)
DNA repair and recombination proteins [BR:
ccel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCDG5_1093 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCDG5_1093 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
AAA_30
YqbF_HeH
DUF87
AAA_22
Microtub_bd
Gp49
Motif
Other DBs
NCBI-ProteinID:
CDZ24210
UniProt:
A0A078KSQ8
LinkDB
All DBs
Position
I:complement(1173404..1175368)
Genome browser
AA seq
654 aa
AA seq
DB search
MDKFKLVSKYSPTGDQPEAIEKLTNGVLKGYKEQTLLGVTGSGKTFTMANIIANVNKPTL
VLAHNKTLAAQLCSEFKEFFPENAVEYFVSYYDYYQPEAYIPQTDTYIEKDSSINDEIDK
LRHSATSALSERRDVIIVSSVSCIYSLGDPIDYRNLVISLRPGMVRDRDDIIKKLVEIQY
ERNDINFTRNKFRVRGDVLEVFPAYSGDSAIRIEFFGDEIDRITEINTVTGEVKGVLSHV
AIYPASHYIVPRDKMERAIMEIEQEMEERIEWFKRHGKLIEAQRIEQRTKYDIEMMREVG
FCSGIENYSRVLSGRKPGSAPFTLLDYFPDDYLLFVDESHVTLPQVRGMYGGDRARKKNL
VDYGFRLPSAYDNRPLNFDEFTERINQVIYVSATPGEYERSRSAQIVEQVIRPTGLLDPE
VSVRPTNGQIDDLLSEINKRTARKERVLVTTLTKKMAEDLTRYLDGMGVKVRYMHHDIDA
IERMEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNASGYVIMYADSVTESMERAINETLRRRSIQMKYNEEHGITPKTIVKDVHDIIEITKK
EDTPDRKTFKKLSKREREAVIKKLEKEMREASRMLEFEHAAFLRDKIKELKGND
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggataaattcaaactggtttcaaaatacagtcccaccggtgatcagccggaagcaatc
gaaaaacttactaatggcgtattaaaaggctacaaagaacagactttgctcggtgtaaca
ggttctggcaagacttttacgatggcaaatataatcgcaaatgtaaacaaacctactctt
gtgctcgcacacaacaaaacgcttgcagcccaactgtgtagcgagtttaaagaatttttt
cccgaaaacgcggttgagtatttcgtgagctattacgattattatcagcctgaagcatat
attcctcagacagatacgtatatcgaaaaagattcctcgattaacgatgaaatagacaag
ctgcgccactccgcgacctccgcgttgtcggagcggagagacgttattattgtgtccagt
gtttcatgtatctacagcctcggtgacccgattgattaccgaaatcttgtcatttcattg
cgtcccggcatggtgcgagaccgcgacgacatcataaaaaagcttgtggaaattcaatac
gaacgcaatgatatcaatttcacccgcaataaattccgggttaggggagatgttctggaa
gtatttccggcgtattctggtgattccgcaattagaatagaattttttggcgacgaaatc
gacagaattaccgaaataaataccgtgaccggtgaagttaaaggcgttttaagccatgtt
gcaatctatcctgcttctcattatatcgttccccgcgataagatggaaagggcgataatg
gaaatcgagcaggagatggaagagcgtattgaatggtttaaaaggcatggcaagcttata
gaggcgcagcgtatcgagcaaaggacaaaatacgatatcgaaatgatgcgtgaagttggt
ttttgcagtggcatcgagaactattcgagagtgctttcgggccgtaaacctgggagcgct
ccatttacgctgcttgattatttccccgacgattatcttttgtttgtggatgaatcacat
gtcacactgccgcaggtaagaggcatgtacggcggagatagggcccgaaaaaagaatctt
gttgactacggattccgcctgccttcagcatatgacaaccgtccgcttaactttgatgaa
tttacggaacgcataaatcaggtcatttatgtcagcgctacgcccggcgaatatgaaagg
agcaggagtgcccagattgtcgagcaggttatacgtccgaccggactgcttgacccagaa
gtcagcgttaggccgaccaatggccaaattgatgaccttctttcagaaatcaataaacgc
acagcgagaaaagagcgcgtactggttacgacgttaactaaaaagatggcggaagatttg
acacgttatcttgatggcatgggtgttaaagtaagatatatgcaccatgacatagatgca
atcgagcgtatggagattatacgcgatcttcgccttggtgaatttgacgttcttgtcggt
attaacctgcttcgcgagggattggatatccctgaagtgtcgcttgtagctattcttgac
gctgataaagagggatttctgcgcagtgaaacatctcttattcagacaataggcagggcg
gcgagaaacgcctctggctatgtcattatgtacgctgacagcgttacagagtcgatggaa
cgcgcaattaacgaaactttgaggcgccgttctattcagatgaaatataatgaagaacac
ggcataacgccgaaaactatcgttaaagacgttcatgatattattgagattactaaaaaa
gaagatacgcctgatagaaaaacatttaagaagctgtcaaaacgtgaacgtgaagccgtt
ataaagaagctcgaaaaagaaatgcgagaggcttcaagaatgcttgaattcgaacatgca
gcatttttgcgcgataagataaaagaacttaagggcaacgactga
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