Clostridium cellulosi: CCDG5_1225
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Entry
CCDG5_1225 CDS
T03806
Symbol
ykfD
Name
(GenBank) putative oligopeptide transport ATP-binding protein YkfD
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
ccel
Clostridium cellulosi
Pathway
ccel01501
beta-Lactam resistance
ccel02010
ABC transporters
ccel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CCDG5_1225 (ykfD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCDG5_1225 (ykfD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CCDG5_1225 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccel02000
]
CCDG5_1225 (ykfD)
Transporters [BR:
ccel02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CCDG5_1225 (ykfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
DUF5906
AAA_22
AAA_16
AAA_5
RNA_helicase
ATP-synt_ab
RsgA_GTPase
MMR_HSR1
PRK
AAA_29
AAA_13
Motif
Other DBs
NCBI-ProteinID:
CDZ24339
UniProt:
A0A078KTE9
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All DBs
Position
I:complement(1311840..1312796)
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AA seq
318 aa
AA seq
DB search
MSEELIRTEGLKQYFHVKNSFSRGVVKAVDGISLSIAKGETLGLVGESGCGKSTFGRTLL
RLIEPTDGKIFYEGKDVTKGDFTPYRRKMQIIFQDPYASLDPRMTVADIVGEPLDIHKLY
KNKKERKERIMELLRMVGLNSDHAQRFPHEFSGGQRQRIGIARALAVQPSFVVCDEPVSA
LDVSIQAQIINMLEEMQKKLKLTYLFIAHDLSVVKHISDRVGVMYLGSLVELAPSDELYR
NPIHPYTQALISAIPIAKPKSEITTKRQILKGEIPSPLNPPSGCKFRTRCPMAKPECAEV
VPQLHEVMPGHYSSCILK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaacttataagaacagaaggactaaaacagtattttcatgtaaaaaatagt
tttagccgcggagtcgtcaaagctgttgacggcatatcgctttccatagcaaaaggtgaa
acattaggccttgtcggtgaaagcggatgcggaaaatctacatttggaagaacactttta
agattgattgaaccgacagacggcaagattttctatgagggcaaggatgtaacaaaaggc
gattttacaccctaccgcaggaagatgcagatcatattccaggatccatacgcttctctt
gaccccagaatgactgttgcggatattgtcggtgaacccctcgatatccataagttatac
aagaataaaaaagagcgcaaggagcgtataatggagcttctgcgtatggtagggcttaac
tccgaccatgcacagcgcttcccgcatgaattttcaggcggtcagcgtcagcgtataggc
atagcgagagcgcttgcggtgcagccgtcgtttgtcgtttgcgacgagccggtttcggcg
cttgatgtttctatacaggcacagataattaatatgcttgaggaaatgcagaaaaaatta
aagctgacatatctttttatcgcccatgatttgtcagttgttaaacatataagcgacaga
gtcggagttatgtatttgggttcactcgttgagttagcgccgagtgatgaattatacaga
aatccgatacatccgtatactcaggctcttatttctgcaattccaattgcgaagccgaag
tcagaaatcacaacaaaaaggcagatactaaagggtgagattccttcaccgcttaatccg
ccttcagggtgcaagttccgcacacgctgcccaatggcaaagccggaatgtgcggaggta
gtgccgcaattgcatgaagtaatgccggggcattatagttcctgcattttaaaatag
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