Clostridium cellulosi: CCDG5_1295
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Entry
CCDG5_1295 CDS
T03806
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCDG5_1295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccel03400
]
CCDG5_1295
Enzymes [BR:
ccel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCDG5_1295
DNA repair and recombination proteins [BR:
ccel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCDG5_1295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
TrwB_AAD_bind
PIF1
Zn_ribbon_6
Zn_Ribbon_TF
AAA_22
AAA_16
nSTAND_NTPase5
AAA_30
AAA_19
DUF1258
SWI2_SNF2
DUF6553
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
CDZ24409
UniProt:
A0A078KTJ8
LinkDB
All DBs
Position
I:complement(1387510..1389978)
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AA seq
822 aa
AA seq
DB search
MPSFKIAEVAVEGTAYHFDKPYCYMVPDDMKNEIKPGARVVVPFGAGNKRRRGIVLAVEN
SDDMSCKPLLTLVDKQPLISEEMLALAAWLKGRTFCTLYEALRLMLPAGLNLHITKTYKL
DHKPSEAEFLMLSPDEQCMLRYVSRARGPVDRESLAKAAGLDATTPLPDLLVQRGLLVCE
DSVFDHSPEASARMVRLAITQEEAEELLESQGEITKKQKSALKTVLDAGAATVKEVMYFS
GVSQSVITALVKKGIFEQFEKRVYRDPYKGIAKTKSEPETLSEEQQNAYNALVSRYRSGK
ACASLLFGVTGSGKTQVFMRLIDDVRADNRTVIVLVPEISLTPQTVARFYARFGKDVAVL
HSGLSLGERLDEWQRIKDGGAGIVVGTRSAIFAPLKNLGLIIIDEEQEYTYKSESSPRYH
ARDVARFRCAYSNAMLLLASATPSIETFYAAQTGRYELTRLDKRYGNAKLPDVIMVDMKN
EIATGNNSTISRRLAQEIEKNLENGEQSILLINRRGYNTFVSCAACGHVLTCPNCSIALT
YHAANHRLMCHYCGYSIEARTKCPECSGSFLKYSGTGTQKAEQAIEELFPTARVLRMDTD
TASGRYSHERMLEQFGKDKYDILIGTQMVAKGLDFPNVTLVGVLSADQSLYLNDFRAAER
TFSLLTQVIGRAGRRASPGRAVIQTQTPENEVLRLAAKQDYEAFYKSETAFRRELLYPPF
CDICEFGFTGISETAVKNAAHDFFMRLKDAIESNKNIPIRIMEPSPAEIARIAGRYRYRI
IAKCRNDKHFRALVASVLESCGKSPLYRKVSVFADMNPLDML
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcatttaagattgccgaggtagcggttgaaggaacggcgtatcattttgacaag
ccatactgctatatggttcccgacgacatgaaaaacgaaataaaaccgggcgcaagggtg
gtagtgccttttggggcgggcaacaaacggcgccggggaatagttttagccgtagagaat
agtgatgacatgtcctgtaagccgctgctaactcttgttgataaacaaccgctgatttca
gaagaaatgctcgcactggcagcgtggcttaaaggtcgtactttctgtacactttatgag
gctctcaggcttatgctgcctgcgggccttaatttgcatataacaaaaacctataagctt
gaccacaagccttccgaggctgagtttttaatgctttcgccagatgagcagtgtatgctg
cggtatgtgagccgggcgcggggcccagttgaccgcgaaagcctcgcaaaggcggcggga
ctggacgctacaacgccgcttccggatctgcttgtccagcgcgggctgcttgtctgcgag
gacagcgtgtttgatcattcgccggaagcctcggcacgcatggtgcggctggcgattacg
caggaagaggccgaggaactgcttgaatcacagggtgagataacaaaaaagcagaaaagc
gcccttaaaacagtgcttgacgccggtgcggcaacggtaaaagaggtaatgtacttctcc
ggtgtctcgcagtcagttataacggcgcttgtcaaaaagggcatttttgagcagtttgaa
aaacgggtataccgtgacccatacaaaggtatcgcaaaaaccaaatccgaacccgaaacg
ctttcagaggagcagcaaaacgcctataacgcgcttgtttcaagatatagaagcggcaag
gcctgtgcctcactgctgtttggcgtgacaggcagcgggaaaacgcaggtttttatgcgg
ctcattgacgatgtaagggccgacaacaggacggtaatagtgcttgtgccggaaatttca
ctgaccccccagacggtggcaaggttctacgcgcgttttggaaaggatgttgcggtactg
cacagcggcctttccctcggcgagcgtttagatgagtggcagcggattaaagacggcggc
gcgggcattgtggtcggcacgcgttcagcgattttcgcgccccttaaaaacttgggcctt
atcatcatcgacgaagaacaggaatatacatataaatccgagtcctcgccgcgctatcac
gccagggatgtcgcccgtttcaggtgtgcttattcaaatgccatgctgctgcttgcctct
gcgaccccgtccattgagaccttctatgcggcccaaaccggaagatatgagctaacaagg
ctcgataaaaggtacgggaacgctaagcttccggacgtaatcatggtcgatatgaaaaat
gaaatagccacagggaacaatagtacgataagccgccggttagcgcaggaaattgaaaaa
aaccttgaaaacggagagcaatctattctgcttatcaacagaagaggatataatactttt
gtaagctgcgctgcctgcggtcatgtactgacttgtcccaattgcagtatcgcattgacc
taccatgcggcgaaccaccgcttgatgtgccattactgcggctatagcatcgaagcccgc
acaaaatgtccggaatgttccggcagctttttaaagtattcaggcaccggaacgcagaag
gcggaacaggcgattgaggagcttttcccgacggcgagggtcctgcgtatggataccgac
acggcctcgggaagatattcccacgaaagaatgcttgaacaatttggaaaagataagtat
gatatattgatagggactcagatggtggcaaagggactggattttccgaatgtaacgctc
gtcggggtgctttcagcggaccagtcgctgtatttgaacgatttcagggctgccgagcgc
actttctcactgctgacacaggttatcggcagggcgggcagaagggcgagcccggggcgg
gcggtaatacagacgcagactccggaaaatgaagtcctgcgccttgccgcaaaacaggac
tacgaggctttttataaatcagaaacggcctttcgccgcgagcttttgtatccgccgttc
tgtgacatatgtgaattcgggtttaccggcatatcggaaactgcagttaagaacgcggcg
cacgatttctttatgagacttaaagatgctattgagtcaaataagaatataccaatcaga
ataatggagccatcaccggccgagattgcaaggatagcaggaagatatcgttaccgtatt
attgcaaaatgccgtaacgacaaacacttccgtgctcttgtagcgtcggttttggaaagc
tgcggcaaaagcccgttatatcgaaaggtttccgtattcgccgatatgaatccgcttgat
atgttataa
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