Clostridium cellulosi: CCDG5_1671
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Entry
CCDG5_1671 CDS
T03806
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ccel
Clostridium cellulosi
Pathway
ccel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCDG5_1671 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccel03021
]
CCDG5_1671 (sigA)
Transcription machinery [BR:
ccel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCDG5_1671 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
CDZ24779
UniProt:
A0A078KUK0
LinkDB
All DBs
Position
I:complement(1788853..1789947)
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AA seq
364 aa
AA seq
DB search
MNTDKKSAIHELIEIGKSKGHLTETEITDALEEIDFDPEQMEKLYDTLESQNIEIIDDLS
EPSPDDLSDDDVEVNEAEDLEASLSAEGISIDDPVKVYLKEIGRVPLLTSEEEIELARRM
SNGDEEARKRLSEANLRLVVSIAKRYVGRGMQFLDLIQEGNLGLIKAVEKFDYTKGYKFS
TYATWWIRQAITRAIADQARTIRIPVHMVETINKVVRVERQLLQELGRQPQANEIAQVMG
MSVEKVREIMKVAQEPVSLETPIGEEEDSHLGDFIPDEDAPAPAEAASHILLREQLGDVL
HTLTPREEKVLRLRFGLDDGRPRTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLK
DFLD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggataaaaaatccgctatccatgaactgatcgaaattggcaagagcaaaggg
catctgacagaaacagagattaccgacgcccttgaggaaattgactttgatcccgagcag
atggagaagctttacgatacgcttgaaagccagaatatcgagattatcgacgacctaagc
gaaccgtcaccggatgatttgtccgatgacgatgtggaagtgaacgaggcagaggacctt
gaggcgtcgctttcagcggaaggcatctcaatcgacgacccggttaaggtttatcttaaa
gaaatcggacgtgttccgcttcttacgagcgaagaagaaattgagcttgcccgcagaatg
agcaatggcgacgaagaggcccgcaagcgcctttctgaggcgaacttaagacttgttgtc
agcatagcaaagcgctatgtcggcagaggcatgcaattccttgatttgattcaagagggt
aacctcggacttatcaaggctgttgaaaagtttgactatactaaaggatacaaattctca
acctatgcaacctggtggataaggcaagcgataacccgcgctattgccgaccaggcgagg
actatccgcatacctgttcacatggtcgaaacaatcaacaaggttgtccgcgttgagcgc
cagttgctccaagagcttggacgccagccgcaggccaatgagattgcacaggttatgggc
atgtctgttgaaaaagtgcgtgaaattatgaaagtagcgcaagaaccggtttcccttgaa
acacctataggtgaggaagaagacagccatctcggcgatttcattccggatgaggacgct
ccagctccggcagaagccgcatcccacatacttctgcgtgaacagctcggcgatgtcctg
catacactgaccccaagggaagaaaaagtcctccgcctgcgctttggccttgacgatggg
cgcccgcgcactcttgaggaagtgggcaaggaattcaatgtcaccagggaacgcataagg
cagattgaggcaaaggcgctcagaaagctgagacacccgagccgcagcaagaagctcaag
gattttcttgactga
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