Clostridium cellulosi: CCDG5_1685
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Entry
CCDG5_1685 CDS
T03806
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ccel
Clostridium cellulosi
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccel03009
]
CCDG5_1685 (rimO)
Enzymes [BR:
ccel01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CCDG5_1685 (rimO)
Ribosome biogenesis [BR:
ccel03009
]
Prokaryotic type
ribosomal protein modification factors
CCDG5_1685 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CDZ24793
UniProt:
A0A078KQS3
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All DBs
Position
I:complement(1811842..1813185)
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AA seq
447 aa
AA seq
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MPIRVGMISLGCPKNQVDAEIMLARLHDENYVLTPDVSSADVVVINTCGFIEDAKKESIE
NILEMAQLKKEGKIKGIVVTGCLAQRYFKEMEQEFPEVSCILSVGSAGAIAQAVKAAYEN
KKLNLYEAPEKLEISGKRVKTTLPFYSYLKIAEGCNNRCSYCIIPYLRGRYRSRPIEELV
NEAKELAEGGVKELILVAQDTTRYGEDLYHKLALPQLLRELCKIEKLKWIRILYCYPDMV
TDELIDVIANEEKIVKYIDLPIQHVSPRIVKAMNRRDTKEDLEALIKKLREKIPGVILRT
TLIVGFPGETEEDFALLDEFVREIKFDRLGVFTYSQEEGTPAAVMPNQIDEEVKARRQEI
IMETQSQIVESKNNAMIGKTIEVLCEGYDKHAGYCYGRSAADAPEIDGKVFFTAKKRPAA
GEFVNVRITDVCDYDLTGEAVLEKWRE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccaataagagtaggcatgatatctcttggatgtccgaaaaatcaagtcgatgccgaa
ataatgcttgcacgcctgcatgatgagaattatgtactgacgccggacgtaagctcggca
gatgtagttgtaataaacacctgcggatttattgaagacgctaagaaagaatcaattgaa
aatatactcgagatggcccaactgaaaaaagaggggaaaataaagggcattgtagtcacc
ggatgccttgcgcagcggtattttaaagagatggagcaggaattccccgaggtcagctgt
atcctctcggttggcagcgccggagcaatcgcacaggctgtcaaagctgcatatgaaaat
aaaaagctgaatttgtatgaagcaccggaaaagcttgaaatcagcggcaaacgcgttaag
acgacgctgccgttctattcatatttgaagattgcggaaggctgcaataaccgctgctcc
tactgcattatcccctatcttcgcggaaggtacaggagccgcccgattgaggagctggta
aacgaggcaaaggaacttgccgagggcggcgttaaggagcttatcctcgttgcgcaggat
acgacccgctacggcgaggatctgtatcacaaactggctctgccgcagcttctgcgcgaa
ctttgcaaaattgaaaagctcaaatggataaggattctctactgctatcccgacatggtg
acagatgagcttattgacgtcattgcgaacgaagagaagatagtcaagtatattgacttg
ccgattcagcatgtgagcccgaggattgtaaaggcgatgaaccgccgggataccaaagag
gaccttgaagcgctcataaagaagcttcgggagaagatccccggagtaatcctcagaacc
acgctgattgtcggttttcctggggagacagaagaggatttcgcacttcttgacgaattt
gtcagggagataaagtttgacaggctcggcgttttcacctattctcaggaagaggggacg
ccggcggccgttatgcctaaccagattgatgaggaggttaaggcgcgccgtcaggaaatt
atcatggaaacccagtcccagattgttgaatccaagaacaacgccatgataggcaaaacc
atagaggttttatgtgaagggtacgacaaacatgcggggtactgttacggcaggagtgcc
gcagacgccccggaaattgacggaaaggtatttttcacggcaaaaaaaaggccggctgcg
ggcgaattcgtcaacgtcagaataactgatgtctgcgattatgacctcaccggtgaagca
gtcttagaaaagtggagggaataa
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