Clostridium cellulosi: CCDG5_1929
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Entry
CCDG5_1929 CDS
T03806
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
ccel
Clostridium cellulosi
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccel03021
]
CCDG5_1929
Transcription machinery [BR:
ccel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCDG5_1929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_Crp_2
TetR_C_19
Phage_CII
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CDZ25021
UniProt:
A0A078KMP3
LinkDB
All DBs
Position
I:complement(2056531..2057151)
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AA seq
206 aa
AA seq
DB search
MVVNINTAYRKYKENQATLDLIIDGGEGIIRHYSKIYGGGLDSDDLYQTGVVGLIKAVRT
FDPSHGTSFSTWACACVISEIRHYVRHETACSRCEDWSESIDEAEEGELAIAAELQRQKP
FHLALDDKIMLEQAFSKLKPLQHKVVEALFFRDMTQEQTANELGLTQRKVSRVKSAAINT
LRSLLDVDNFKITDKKDSFKLIKGTK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcaatattaacaccgcttaccgtaaatacaaagaaaaccaagccaccctcgat
ttaataatcgacgggggtgaaggcattatacggcattattcaaaaatatacggcggcgga
ctcgacagcgacgacttgtatcagacgggtgtagttgggctgattaaggcggtgcgtacg
ttcgacccatcccatggcacatctttttcaacatgggcctgtgcctgcgtcatcagtgaa
atacgccattatgtccgccatgagactgcctgcagccgctgcgaagattggtcagagagt
attgacgaagcggaggagggggagttggctattgcggccgaactccagagacaaaaaccg
tttcacttagcgcttgatgataagattatgctcgaacaggccttttcaaagctgaaaccg
cttcagcataaggtagtagaagcgctgtttttccgcgacatgactcaggagcagacagca
aacgaacttggtttgacccagcgaaaggtcagccgcgtaaagagcgccgctataaataca
cttcgcagccttttggatgtggataattttaaaatcaccgataaaaaagacagctttaag
ctaataaagggtactaaatga
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