Clostridium cellulosi: CCDG5_2071
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Entry
CCDG5_2071 CDS
T03806
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccel
Clostridium cellulosi
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccel03016
]
CCDG5_2071 (truB)
Enzymes [BR:
ccel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCDG5_2071 (truB)
Transfer RNA biogenesis [BR:
ccel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCDG5_2071 (truB)
Prokaryotic type
CCDG5_2071 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
ARPC4
AAA_22
DotZ
Motif
Other DBs
NCBI-ProteinID:
CDZ25151
UniProt:
A0A078KMY7
LinkDB
All DBs
Position
I:complement(2208870..2209790)
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AA seq
306 aa
AA seq
DB search
MNGVICIDKPSGMTSFDVVAIVRSLTNERKVGHAGTLDPMATGVLPIFLGGATKAIPLLL
NHDKRYAAGLRLGIKTDTGDITGKVLATSEVSATPEQVEAAVLSFKGNIKQIPPMYSALK
SGGRHLYDIAREGGYVERKPRDITIYDIGVTGRDESSGDYLIDVYCSKGTYIRTLCEDIG
DKLGCGGTMSSLRRTYAAGFDLTSCITLDEAERLAEEDKLDTVILNVEELFKELPEIHIT
KNQAVRFRNGGALSFDRLHGAPQSGLCRVKYADIFLGLGESNKEKRQINVKCHFNREIPL
NSGEVI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgtaatctgcattgacaaaccgtcagggatgacatctttcgatgttgtcgct
attgtgcgcagccttaccaatgagcgaaaggtgggccacgccggaaccctcgacccgatg
gcgaccggggtactccccattttcttaggcggtgcgacaaaggctataccgcttttactc
aaccatgacaaaagatatgctgccggactgaggcttggcattaaaaccgataccggggat
ataaccggaaaagtccttgcgacctctgaagtatctgcaacgccggagcaggttgaagcg
gcggtgctttcctttaaaggtaacataaagcagataccgcctatgtattcggcgctgaaa
tcgggcggcagacacctttacgatattgcgcgggagggcggttatgttgaacgcaagccc
cgggatatcactatttatgatattggtgtcaccggccgggatgagagcagcggtgattac
ttaattgacgtgtattgctccaaagggacatacataagaacgctctgcgaggatattggt
gataagctcggctgcggcggcacgatgtcgtcactgcggcggacttatgccgctggcttc
gatttaacctcgtgtatcacccttgatgaggcagaaaggcttgccgaagaggataaactg
gatacagttatacttaatgtagaagaattgtttaaggaactgcctgagattcatataact
aagaaccaggctgtcaggttccgaaacggcggggcgttgtcattcgacaggctgcacggt
gctccgcaaagcgggttatgccgggtaaaatatgcggatatatttttagggctcggcgaa
tccaataaagaaaaaagacagattaatgtaaaatgtcatttcaaccgggaaattccacta
aatagcggggaggttatttaa
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