Cellulosimicrobium cellulans: CBR64_13455
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Entry
CBR64_13455 CDS
T04858
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cceu
Cellulosimicrobium cellulans
Pathway
cceu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cceu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBR64_13455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cceu03021
]
CBR64_13455
03400 DNA repair and recombination proteins [BR:
cceu03400
]
CBR64_13455
Enzymes [BR:
cceu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBR64_13455
Transcription machinery [BR:
cceu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBR64_13455
DNA repair and recombination proteins [BR:
cceu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBR64_13455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ARU52314
UniProt:
A0A1Y0HYH4
LinkDB
All DBs
Position
3147012..3150893
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDDEGRQEDLPNLQNEIDLEKKEIADARDNDINSRAQKLEAD
LAELEAEGAKADARRKVRDSAEREMAQIRKRADAQLDRLDQVWDRFKNLKVADLEGDEML
YRALQDRYGTYFEGSMGAAAIQKRLQDFDLEAEAESLRETIRSGKGQRKTRALKRLKVVN
AFLTTTNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDRKGAEGEGR
AFGSVAEAIMAFDQGTLDLNAEVKIRTTDLVPPVSGFEAPEGWEEGQPILFDTTLGRALF
NETLPVDYPYVNSVVDKKRLSAIVNELAERYPKVEVAASLDALKAAGFRWATRSGVTIAI
SDVATPKEKAVILEQHEERALKVQQQYDRGLITDDERRQELIEIWTQATDKVASVMRENL
EANDRNTVYRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFI
ATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERGLTLPIAEELAGKLVR
HPKVETSVYSRTLAADLVDPDGNVVGKAGDDAGDVLIDAAVAAGVREAKVRSVLTCESRV
GTCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPR
VTELFEARTPKGEAPIAEFSGRIAIDDTERSRRLVLTPDDGSEEIAYPVTKRARLLVQDG
DQVSVGTQLVQGAVDPKKVLRILGPRATQKHLVDEVQEVYRSQGVDIHDKHIEVIVRQML
RRITVLDSGDAPLLPGELAERGRFEDANRRTVAEGGQPASGRPELMGITKASLATDSWLS
AASFQETTRVLTEASMSGRRDPLLGLKENVIIGKLIPAGTGLPRYTKVQVEPTEQAKTEL
YPSFGYDEIDFPALGMGSGEAIPLEDLDFGDYR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgcatcggcctggccacggccgacgacatc
cgtgcgtggtcgcacggagaggtgaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctcgaaggtgcgtcgtgagcgcatgggccacatcgagctcgccgctccc
gtcacgcacatctggttcttcaagggcgtgccctcgcgcctcggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgtcggtcgac
gacgagggtcgccaggaagacctccccaacctccagaacgagatcgacctggagaagaag
gagatcgcggacgcccgcgacaacgacatcaactcccgcgcccagaagctcgaggccgac
ctggccgagctcgaggccgagggtgcgaaggccgacgcgcgccgcaaggtccgcgactcg
gccgagcgcgagatggcgcagatccgcaagcgcgcggacgcccagctcgaccgcctcgac
caggtgtgggaccgcttcaagaacctcaaggtcgccgacctcgagggcgacgagatgctc
taccgcgccctccaggaccgctacggcacctacttcgagggctcgatgggcgccgcggcg
atccagaagcgtctccaggacttcgacctggaggcggaggccgagtccctgcgcgagacc
atccgctcgggcaaggggcagcgcaagacgcgtgccctcaagcgcctcaaggtcgtcaac
gcgttcctcaccacgacgaactcgcccacgggcatggtgctcgacgccgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacgagcgacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccgcctcaagcgtctgctcgacctg
ggcgccccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggactcg
ctgttcgacaacggccgccgtggtcgtccggtcacgggccccggcaaccgcccgctgaag
tcgatctcggacatgctcaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctcgagctgttcaagccgttcgtcatgaagcggctc
gtggacctcaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtgcccgc
ccggtcgtgtgggacgtgctcgaagaggtcatcacggagcaccccgtgctgctcaaccgt
gcgccgacgctgcaccgcctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gcgatccacctgcacccgctggtgtgcgccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgcccctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggtcgtccggtgaccatgccgtcgcaggac
atgatcatcggcctgtaccacctgacgagcgaccgcaagggcgccgagggcgagggccgc
gcgttcggctcggtcgccgaggcgatcatggcgttcgaccagggcaccctggacctgaac
gccgaggtgaagatccgcacgacggacctcgtcccgccggtctccggcttcgaggctccc
gagggctgggaggagggtcagccgatcctcttcgacaccacgctcggtcgtgcgctgttc
aacgagacgctccccgtcgactacccgtacgtgaactcggtcgtcgacaagaagcgcctc
tcggcgatcgtcaacgagctcgcggagcgctacccgaaggtcgaggtcgcggcgtcgctc
gacgcgctgaaggccgccggcttccgctgggcgacccgctccggcgtcacgatcgcgatc
tccgacgtggcgacgcccaaggagaaggccgtcatcctcgagcagcacgaggagcgcgcg
ctcaaggtccagcagcagtacgaccgtggtctcatcacggacgacgagcgccgtcaggag
ctcatcgagatctggacccaggcgacggacaaggtcgcgtcggtcatgcgcgagaacctc
gaggcgaacgaccgcaacaccgtgtaccgcatggtcggctcgggtgcccgtggtaactgg
atgcaggtccgtcagatcgccggcatgcgcggtctcgtggcgaacccgaagggcgagatc
atcccgcgcccgatcaagtccaactaccgcgagggcctgtccgtcctcgagtacttcatc
gcgacgcacggcgcccgcaagggtctggcggacaccgctctgcggaccgccgactcgggt
tacctcacgcgtcgtctcgtggacgtgtcgcaggacgtcatcgtccgcgaggaggactgc
ggcacggagcgcggcctgaccctgccgatcgcggaggagctcgcgggcaagctcgtgcgc
cacccgaaggtggagacgagcgtctactcgcgcaccctcgcggccgacctggtcgacccc
gacgggaacgtcgtcggcaaggccggcgacgacgcgggcgacgtcctcatcgacgccgcg
gtggccgcgggcgtccgcgaggccaaggtccgctcggtcctcacgtgcgagtcgcgcgtc
gggacgtgcgccaagtgctacgggcgctcgctcgccacgggcaagctcgtcgacatcggc
gaggcggtcggcatcatcgccgcccagtcgatcggtgagccgggcacccagctgacgatg
cgtacgttccacaccggtggtgtggcgtccgcggacgacatcacgcagggtctgccccgt
gtcacggagctcttcgaggcccgcacccccaagggtgaggcgcccatcgcggagttctcg
ggtcgcatcgcgatcgacgacacggagcgctcgcgccgtctcgtgctgacgccggacgac
ggctcggaggagatcgcgtacccggtgaccaagcgcgcccgcctgctcgtgcaggacggc
gaccaggtctcggtcggcacgcagctcgtccagggtgcggtggaccccaagaaggtcctg
cgcatcctcggcccgcgtgccacgcagaagcacctggtggacgaggtccaggaggtctac
cgctcccagggcgtggacatccacgacaagcacatcgaggtcatcgtccggcagatgctc
cgccggatcacggtcctcgactcgggtgacgcgccgctgctcccgggcgagctggccgag
cgtggccgcttcgaggacgccaaccgtcgtaccgtggcggagggtggccagccggcctcc
ggccgtcccgagctgatgggcatcacgaaggcgtcgctcgcgacggactcgtggctgtcg
gcggcctccttccaggagacgacgcgcgtgctcaccgaggcgtcgatgagcggtcgtcgc
gacccgctcctcggcctcaaggagaacgtcatcatcggaaagctcatcccggccggtacc
ggtctgccccggtacaccaaggtccaggtcgagccgaccgagcaggccaagacggagctc
tacccgagcttcggctacgacgagatcgacttcccggcgctcggcatgggctccggcgag
gcgatcccgctcgaggacctggacttcggcgactaccgctga
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integrated database retrieval system
