Cellulosimicrobium cellulans: CBR64_20640
Help
Entry
CBR64_20640 CDS
T04858
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cceu
Cellulosimicrobium cellulans
Pathway
cceu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cceu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBR64_20640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cceu03019
]
CBR64_20640
03400 DNA repair and recombination proteins [BR:
cceu03400
]
CBR64_20640
Enzymes [BR:
cceu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBR64_20640
Messenger RNA biogenesis [BR:
cceu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBR64_20640
DNA repair and recombination proteins [BR:
cceu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBR64_20640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Umbravirus_LDM
Motif
Other DBs
NCBI-ProteinID:
ARU53476
UniProt:
A0A1Y0I0Z6
LinkDB
All DBs
Position
4741256..4743085
Genome browser
AA seq
609 aa
AA seq
DB search
MATTTATDPALDVLRRVFGYDSFRGEQAAIIDTVVGGGDALVLMPTGGGKSLCYQIPALV
RAGTGVVVSPLIALMQDQVDALAALGVRAAFLNSTLSVEDRRAVERALVAGELDLLYVAP
EGLRSRATLDLLDRTQIALFAIDEAHCVSQWGHDFRPDYLELSVLHQRWPSVPRIALTAT
ATAATRAEIAQRLDLEGARHFVSSFDRPNITYRIVPKDRPEKQLLELLRTEHAGEAGIVY
CLSRASVEKTAATLVENGIQALPYHAGLPASVRAANQSRFLREDGLVMVATIAFGMGIDK
PDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLADVVQQRKLIATSDGDAAHR
RNLGQHLNAMLALCETVECRRAQLLAYFGQDHPGGCGSCDTCQAPPEAWDGTVAAQKVLS
TVFRLDRERGQSFGVGQVVDILLGRDTEKVRRFRHQELSVFGVGKDLSEHEWRAVVRQLL
AQGLLTVEGVHGTLVLTAGSGEVLAQRREVRMRHEPARPVRAAKARKAAAGAELAEADVP
LFEALRAWRAGEAKTQGVPAYIVFGDATLRGIATARPASLDGLALLSGVGENKLARYGDA
VLAVVAEAG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggccacaacgactgcgaccgaccccgcgctcgacgtgctccggcgggtcttcgggtac
gactcgttccggggcgagcaggccgccatcatcgacaccgtcgtcgggggcggagacgcc
ctggtcctcatgcccaccggcgggggcaagtcgctgtgctaccagatccccgccctggtc
cgcgcggggaccggcgtcgtggtgtcaccgctcatcgccctcatgcaggaccaggtggac
gccctcgcggcgctcggcgtccgcgcggcgttcctcaactccacgttgtccgtcgaggac
cgccgcgccgtggagcgcgcgctcgtcgcgggtgagctcgacctgctctacgtggcaccg
gaggggctccggagccgcgccaccctggacctgctcgacaggacgcagatcgcgctcttc
gcgatcgacgaggcgcactgcgtgtcccagtggggccacgacttccggcccgactacctc
gagctgtcggtgctgcaccagcgctggccgtccgtcccgcgcatcgcgctgacggcgacg
gcgacggcggccacgcgggccgagatcgcccagcgcctcgacctggagggcgcgcggcac
ttcgtctcgagcttcgaccggcccaacatcacctaccggatcgtgcccaaggaccggccg
gagaagcagctgctcgagctgctgcgcaccgagcacgccggggaggcggggatcgtctac
tgcctctcgcgcgcgtcggtggagaagaccgccgcgacgctcgtcgagaacgggatccag
gcgctgccctaccacgcggggctccccgcgtcggtgcgcgccgcgaaccagtcccggttc
ctgcgcgaggacggcctggtcatggtggcgacgatcgccttcggcatgggcatcgacaag
cccgacgtccggttcgtcgcgcacctcgacctgcccaagtccgtcgaggggtactaccag
gagacggggcgcgccgggcgtgacgggctgccgtccaccgcctggctggcctacggcctc
gccgacgtcgtgcagcagcgcaagctgatcgcgacgtccgatggtgatgccgcgcaccgg
cgcaacctgggccagcacctgaacgcgatgctcgccctctgcgagaccgtcgagtgccgc
cgcgcccagctcctcgcctacttcggccaggaccaccccgggggctgcgggtcgtgcgac
acgtgtcaggccccgcccgaggcctgggacgggacggtcgccgcgcagaaggtgctctcg
acggtgttccgtctggaccgcgagcgcgggcagagcttcggcgtcgggcaggtcgtcgac
atcctcctcggccgggacacggagaaggtccggcggttccggcaccaggagctgtcggtg
ttcggggtcgggaaggacctgtccgagcacgagtggcgagccgtggtgcgtcagctgctc
gcccaggggctgctcactgtcgagggcgtgcacgggacgctcgtgctcaccgcggggagc
ggggaggtcttggcccagcggcgcgaggtccggatgcggcacgagccggcgcgtccggtg
cgcgcggcgaaggcacggaaggcggccgctggcgccgagctcgccgaggccgacgtcccg
ctcttcgaggcgctgcgcgcctggcgggcgggcgaggcgaagacccagggcgtgcccgcg
tacatcgtgttcggggacgccacgctccgcgggatcgcgaccgctcggcccgcctcgctc
gacgggctcgcgctgctgagcggcgtcggcgagaacaagctggcccggtacggcgacgcg
gtgctggcggtcgtcgccgaggcgggatga
DBGET
integrated database retrieval system
