Campylobacter coli RM1875: YSQ_00015
Help
Entry
YSQ_00015 CDS
T03164
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ccf
Campylobacter coli RM1875
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccf03032
]
YSQ_00015
03400 DNA repair and recombination proteins [BR:
ccf03400
]
YSQ_00015
Enzymes [BR:
ccf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YSQ_00015
DNA replication proteins [BR:
ccf03032
]
Prokaryotic type
DNA Topoisomerases
YSQ_00015
DNA repair and recombination proteins [BR:
ccf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YSQ_00015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
PA_decarbox
Motif
Other DBs
NCBI-ProteinID:
AHK72403
LinkDB
All DBs
Position
2587..4899
Genome browser
AA seq
770 aa
AA seq
DB search
MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGHCDTIDI
EITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFDKDTYKVSGGLHGVGVS
VVNALSKKLVATVERNGEIYRQEFSEGKVISEFDIIGKSKKTGTTIEFWPDDTIFEVTEF
DYDILAKRFRELAYLNPKITINFKDNRVDKSESFHFEGGISQFVSDLNKKEALTKPIFFS
VDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGTHEAGFRMGLTRVISNYIEANASAR
EKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSKASFEYLSKYFEEN
PIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTLPGKLADCQSKDPSESEIYLVE
GDSAGGSAKQGRERSFQAILPLRGKILNVEKARLDKILKSEQIQNMITAFGCGIGEDFDL
SKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMNELVANGHIYLAQPPLYRYKKGQKKEI
YLKDEKALNDYLIETGIESSNYEGIGLNDLKDFLKIVAAYRSVLNELKKRFNVISVIRYL
IENPDFIKENNEELFKIVKAFLEKEGHNILNHYINENEIRIYVQTENGLEELIINDDLFS
HPLYEEANYIFNKIKDRDLSFEKDILDILDEVEKNAKKGAYIQRYKGLGEMNPEQLWETT
MDPSVRRLLKITIEDAQSANDTFNLFMGDEVEPRRDYIQTHAKDVKHLDV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaattatggtgcgagtaatattaaagttttaaaaggcttagaagctgttaga
aaacgcccaggtatgtatataggagataccaatataggcggacttcatcatatgatttat
gaagtagtggataattctatcgatgaagcaatggcaggacattgtgatactatagatata
gaaatcactaccgaaggaagctgtatcgttagcgataatggtcgtggaattcctgtagat
atgcaccctactgaaaatatgccaaccctaaccgtcgttttaaccgttcttcatgcaggg
ggaaaattcgataaagacacttataaggtttcagggggtttgcatggtgtgggcgtttca
gttgtaaatgcactttctaaaaaacttgtagctacagttgaaagaaatggagaaatttat
cgccaagaattttcagaaggtaaagtcatcagtgaatttgatattataggaaagagtaaa
aaaacaggaaccaccatagaattttggcctgatgatacaatttttgaagtaacagaattt
gattatgatattttggctaaaagatttcgtgaacttgcatatttaaatccaaaaatcact
ataaattttaaagataatcgtgtagacaaaagtgaaagttttcattttgagggcggaatt
tcacaatttgttagcgatttaaataaaaaagaagctttaaccaaacctatattttttagc
gtagatgaagaagatgtaaatgtagaagtagctttgctttataatgatacttatagcgaa
aacttgctttcttttgtaaacaatatcaaaacccctgatggtggaacgcatgaagctgga
tttagaatgggtttaacaagagtgattagcaactacatagaagcaaatgctagtgctagg
gaaaaagactctaaaatcacaggcgatgatgtgcgtgaaggacttatcgctgtagtaagt
gtaaaagtgcctgaacctcaatttgaaggacaaactaaaggaaaacttggctcttcttat
gtgcgtcctatagtttcaaaagcaagttttgaatatcttagtaaatattttgaagaaaat
cctatcgaagcaaaagctattatgaataaagctttaatggcagctagaggaagagaagca
gcaaaaaaagcaagagaattaacgcgtaaaaaagaaagcttgagtgtaggaactttgcct
ggaaaattagctgattgtcaaagtaaagatccaagtgagagtgaaatttatcttgtggaa
ggggactctgcgggcggttctgcaaaacaaggaagagaaagatcttttcaagcgattttg
cctttgcgtggtaaaattctaaatgttgaaaaagcaagacttgataaaattttaaaatct
gaacaaattcaaaatatgattactgcttttggttgtggtataggtgaggattttgatctt
tcaaaactaagatatcataaaatcatcatcatgacggatgcggatgtggatggttctcac
atacaaactctacttttaactttcttcttccgttttatgaatgaacttgtggctaatgga
cacatttatcttgcccaaccaccgctttaccgctataaaaaaggtcaaaagaaagaaatt
tatctcaaagatgaaaaagctttgaatgattatctcatcgaaacaggtattgaaagttct
aattatgaaggaattggcttaaatgatttaaaagattttctaaaaatcgttgccgcttat
cgctcggtattaaatgagcttaaaaagcgtttcaatgtgatttctgtgattagatatttg
atcgaaaatcctgactttatcaaagaaaataatgaagaactttttaaaatcgttaaagct
tttttggaaaaagaagggcataatattttaaatcattatatcaatgaaaatgaaattcgc
atttatgtgcaaactgaaaatggtttggaagaacttatcatcaatgatgatttattttca
caccctctttatgaagaggcaaattatatctttaataaaataaaagatcgtgatttgagc
tttgaaaaagatattttagatatcttagatgaagtagaaaaaaatgccaaaaaaggtgct
tatatccaacgctataaaggtttgggtgaaatgaaccctgaacaactttgggaaacaact
atggatccaagcgtaagaagacttttaaaaatcactatcgaagatgcacaaagtgctaat
gatacttttaatctcttcatgggcgatgaggttgaaccaagacgcgattatatccaaaca
catgctaaagatgtaaaacatttggatgtgtaa
DBGET
integrated database retrieval system
