Campylobacter coli RM1875: YSQ_00795
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Entry
YSQ_00795 CDS
T03164
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
ccf
Campylobacter coli RM1875
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccf02000
]
YSQ_00795
Transporters [BR:
ccf02000
]
Other transporters
Pores ion channels [TC:
1
]
YSQ_00795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AHK72541
LinkDB
All DBs
Position
complement(162474..164588)
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AA seq
704 aa
AA seq
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MNPSKRVLKLSLLVFLLSTGINAQELNDKAIQMQKVVVSATGFEQDADNNLRNVIVIDGK
NLEKRGFNTLEQALERISGISFVNFGLGRNIDMRGQGSKSDIAVKVMVNGNAINVLDNSH
GVTPLESVNLNNIERIEIIPGGGSVLYGSGTRGGVINIITKKEKSDAFALSLKGSSYDHG
NLGGNLGVYGAKKINDYLTFGFDIQGFNRDGYQEGYNEKGYFVNTKAYLNTSDNSDLSLN
YNYFESKNTSSGYLTKAQIQSDPTQKGSGDNITQINRPEIALDYHHYFSDLYEIQLGAFW
QNQKIRYLKDEIPMMGTIAYQTGSGFEDTLTGINLKNKINYKDDSYFIFGYEFANHDAKR
TSIVHYNVNTPAFQMSHTMTTLMDMNKQSHSVFALDSHQFNDIFSISGGARYEYSLYDTH
RSYTSKMIMGGTQRPSNPELFDADDTSNNFAFEITPNFKYSDTGNIYAKYERGFISPTPA
QLVNKDQATQKYYTANLDPEIFDTFELGINDFWWDFYGFNLTLFYTLSKDEISYLGNPHS
TGGAFWKYYNIDQTRRLGAELNLHQFLFNDSLILKESLSYLDAQISKGVNDGLRIPYVSK
IKATAGVEYAWNKNLSSYIDLSYFSRAKDGGVVDENTGKMSRNSWIKDYFLTDIGVNYNY
RNLQILAGIRNLFDKQYYTYQDSTNDQYLAGNGRNYYVEFKYAF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgaatccaagcaaaagagttttaaagctatctttactagtatttttactaagcactggt
atcaatgcacaagaattgaatgataaagccattcaaatgcaaaaagttgttgtaagtgca
acaggatttgaacaagatgcagacaataacttgcgtaatgtaattgttatcgatggtaaa
aacttagaaaaaagaggatttaataccttagaacaagccttagaaagaatttcaggcatt
agttttgtaaattttggactaggacgcaatatcgatatgcgtggacaaggaagcaagtcc
gatatagctgtgaaagttatggtaaatggaaatgctattaatgtgcttgataattctcat
ggcgtaactcctttagaaagtgtcaatttaaacaatatagaacgcatagaaatcatacca
gggggaggctctgtgctttatggaagtggcactagagggggtgtgattaatatcattaca
aaaaaagaaaaatccgatgcttttgctctaagtcttaaaggcagtagttacgatcatgga
aatttaggtggaaatttaggcgtttatggggctaaaaaaatcaatgattatctaacattt
ggttttgatatacaaggctttaaccgcgatggctatcaagagggttataatgaaaaaggc
tattttgtcaatacaaaagcctatctaaatactagcgataatagtgatttatccctaaat
tataattattttgaaagcaaaaatacaagcagtggctatcttacaaaagcacaaattcaa
agtgatccgacccaaaaaggaagtggtgataatatcactcaaatcaatagacctgaaatt
gctttagattatcatcattattttagtgatttatacgaaattcaactcggagcattttgg
caaaatcaaaaaataagatatctaaaagatgaaattccaatgatgggcaccatagcttat
caaaccggtagcggttttgaagatacgcttacgggtataaatttaaaaaataaaatcaat
tacaaagatgattcttattttatctttggctatgagtttgcaaatcatgatgccaaaaga
acaagcatagttcattataatgtaaacactccagcatttcaaatgagtcataccatgaca
actctaatggatatgaataaacaaagccattctgtttttgctctagactctcatcaattt
aatgatatttttagtatttcaggtggtgcaagatacgaatacagtctttatgatacccac
agaagttacacaagtaaaatgataatgggcggtacacaacgaccaagtaatccagagctt
tttgacgctgatgatacaagcaataactttgcctttgaaatcactccaaatttcaaatat
tctgatactggaaatatatatgctaaatacgaaagaggtttcatctctccaactcctgca
caacttgttaacaaagatcaagcaactcaaaaatattacactgccaatttagatcctgaa
atttttgatactttcgaacttgggattaatgatttttggtgggatttttatggctttaat
ttgactttattttacactctaagcaaggatgaaatttcttatcttggaaatccacactcc
acaggaggagcattttggaaatattataatatcgaccaaacgcgtcgtttaggagcggaa
ttaaaccttcatcaatttttattcaatgatagcttaatcctcaaagaaagcctaagctat
cttgatgctcaaatttctaaaggtgttaatgacggacttagaattccttatgtttcaaaa
atcaaagccacagccggagtagaatacgcttggaataaaaatttatcaagctatatagat
ttaagctatttttcaagagcaaaagatggcggggttgttgatgaaaatacaggaaagatg
tctagaaattcttggattaaggattattttttaactgatattggtgtaaattataattat
agaaatttacaaattctagcaggcattcgcaatctttttgataagcaatattacacttat
caagacagcacaaatgatcaatatctagccggaaatggtagaaattactatgttgaattt
aaatatgcgttctaa
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