Campylobacter coli RM1875: YSQ_00890
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Entry
YSQ_00890 CDS
T03164
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YSQ_00890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccf03021
]
YSQ_00890
03400 DNA repair and recombination proteins [BR:
ccf03400
]
YSQ_00890
Enzymes [BR:
ccf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YSQ_00890
Transcription machinery [BR:
ccf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
YSQ_00890
DNA repair and recombination proteins [BR:
ccf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
YSQ_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DNA_pol3_a_NII
LPP20
Motif
Other DBs
NCBI-ProteinID:
AHK72559
LinkDB
All DBs
Position
complement(180194..181207)
Genome browser
AA seq
337 aa
AA seq
DB search
MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLRRLLYTSTIGYAPTAIH
IDGVAHEFDSMRGMLEDVALFIINLKKLRFKLKSDSNKEIVEFSFKGPKEIYGKDLNNDQ
VEVVNTDAYLATINEDAELNFTLIIEKGIGYVPSEEIKELLNDPKFIALDAFFTPVREAT
YDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALEAMYKQLSVFDKITNVRSIIKSQ
ATSNELENTKLLQNITDLNLSARSYNCLEKAGIVYIGELALMSVNELAGLKNLGKKSLDE
IKSIMESIGFPVGTSKLSDNKDLLKKKIDELKAQNEG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacattacaacatctgcttatacgccgacagaattcactatagaaaatattagt
gatactgtggctaaaatcagtgcttggccttttgagatcggctatggtattaccctagcc
catcctttacgccgtttactttatactagcactataggttatgctccaaccgctatccat
atcgatggtgtagcgcatgaatttgatagtatgcgtggtatgcttgaagatgtagcactt
tttatcatcaatcttaaaaaattacgattcaaacttaaaagcgattccaacaaagaaatc
gttgagtttagtttcaaaggccctaaagaaatttatggtaaagatctaaacaacgatcaa
gttgaagtcgtaaatacagatgcatatttagcaacgatcaatgaagatgctgaacttaac
tttactcttatcatagaaaaaggcattggttatgtaccaagcgaagagattaaagagctt
ttaaatgatccaaaattcatagctcttgatgcttttttcactcctgtaagagaggcgact
tatgatattgagaaagttttatttgaagacaatcctgactatgaaaaagtagttttaaca
gtaactactgatggacaaatcactccaaacgaagcttttcaaaatgctttagaagctatg
tataagcaattatcagtatttgataagattacaaatgttagaagcatcataaaaagtcaa
gctacaagcaatgaattagaaaatactaaattattgcaaaatattactgatctaaattta
agtgcaagaagttacaattgccttgaaaaagcaggaattgtttacatcggagagcttgct
ttaatgagcgttaatgaacttgctggacttaaaaatttaggcaaaaaatctttagatgaa
attaaaagcattatggaaagcataggcttccctgtgggtacttctaagcttagtgataat
aaagatttgcttaagaaaaaaatcgatgaattaaaagcacaaaacgaaggataa
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