Campylobacter coli RM1875: YSQ_01250
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Entry
YSQ_01250 CDS
T03164
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf00300
Lysine biosynthesis
ccf00470
D-Amino acid metabolism
ccf01100
Metabolic pathways
ccf01110
Biosynthesis of secondary metabolites
ccf01120
Microbial metabolism in diverse environments
ccf01230
Biosynthesis of amino acids
Module
ccf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YSQ_01250
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YSQ_01250
Enzymes [BR:
ccf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YSQ_01250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF4926
Motif
Other DBs
NCBI-ProteinID:
AHK72627
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Position
complement(253654..254403)
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AA seq
249 aa
AA seq
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MKFYKYCASGNDFVIINASEKKDRSALAKELCNRYEGIGADGFIVILPHKKYDFEWEFYN
NDGSTASMCGNGSRAAAHFAHHINGIKPHMAFLTGAGVIKANVDNNSVEVSLGKIKNIQD
AFSECEKNWQLCDTGVPHLVHFCENLDEFDLKLCKQMREKYNANVNFVKVENDNTLRVRT
FERGVEDETQACGTGMGACFYLAFLNKKIHNQARVIPKSGEELSFKFENEELFFKGKVRY
CFEANYNFS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttttataaatattgcgcaagtggcaatgattttgtgataataaatgcaagtgaa
aaaaaagacagaagtgctttagctaaagaactttgcaatcgttatgaaggcataggtgca
gatggttttatagtaattttacctcataaaaaatacgattttgaatgggaattttacaat
aatgatggctcaacagcttcaatgtgcggaaatggctcaagagcagcagcgcattttgca
caccatataaatggtatcaaaccccatatggcttttcttaccggagcaggagttataaaa
gcaaatgttgataataatagcgtagaagtttctttagggaagataaaaaacatacaagat
gcctttagtgagtgtgaaaaaaactggcaactttgcgatacgggagttccacatttggtg
catttttgtgaaaatttggatgagtttgatcttaagctttgcaaacaaatgagagaaaaa
tataatgccaatgtaaattttgtaaaagttgaaaacgacaatactttaagagttcgcact
tttgaaagaggcgtagaagatgaaacgcaagcatgtggcacgggcatgggagcttgtttt
tatcttgcattcttaaataaaaaaattcacaatcaagctagagtgattccaaaaagcggt
gaagagctaagttttaaattcgaaaatgaagaattattttttaagggaaaagtgagatat
tgctttgaagcgaattataatttttcttag
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