Campylobacter coli RM1875: YSQ_04560
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Entry
YSQ_04560 CDS
T03164
Name
(GenBank) biotin attachment protein
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf00020
Citrate cycle (TCA cycle)
ccf00620
Pyruvate metabolism
ccf00720
Other carbon fixation pathways
ccf01100
Metabolic pathways
ccf01120
Microbial metabolism in diverse environments
ccf01200
Carbon metabolism
ccf01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YSQ_04560
00620 Pyruvate metabolism
YSQ_04560
09102 Energy metabolism
00720 Other carbon fixation pathways
YSQ_04560
Enzymes [BR:
ccf01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
YSQ_04560
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
Biotin_lipoyl
HMGL-like
Biotin_lipoyl_2
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
AHK73247
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Position
870091..871884
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AA seq
597 aa
AA seq
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MAKKFIDVMDTSFRDGFQSVYGARVLMQDFFPAVEAAKEAGITHFEFGGGARFQSLYFYL
NEDAFEMMDKFRSIVGKDANLQTLARGVNTVTLDTGSKELIDLHAKLFAKHGTTTIRNFD
ALNDVNNLKFSGECIKKYGLKHEITITLMDLPPNCQGAHDVPFYERILKEILAAEIPFDS
ICFKDASGTSNPNKIYETIKMARKNLPQDVHIRLHTHETAGVSIACYLAALEAGVDGIDL
AAAPVSGGTSQPDILTMMHALKGKNYDLGGLEEEKILKYEAVLKDSLKEYFLPPEATMVS
PLIPFSPMPGGALTANTQMMRDNNILDKFPEVIHAMREVVEKGGFGTSVTPVSQFYFQQA
FNNVMFGSWEKIAEGYGKMVLGYFGKTPVEPDAEVKKLAAKQLNLEPTTELAIDIADKDE
TKSIAYVKSLLEKEGIAVSEENIFIAAACKEKGIAYLKGEAKVNVRKNVSAPKQNSTGID
ENKFTVSVNGNKYHVEISAGFDKDVNIKSIHKADTQEDIMQDADSSEGIQAGISGNVFKI
YINEGEEVKSGQVVMILEAMKMEIEVSAPKDGIIEKICVKTGDSVSENNLVAIYKNN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaatttatagatgttatggatacaagttttagagatggttttcaatctgtt
tacggggctagagtcttaatgcaagatttttttccagcagtagaagcagctaaagaagca
gggataactcattttgaatttggaggtggagcaaggtttcaaagcctttatttttacctt
aatgaagatgcttttgaaatgatggataaattccgttcgattgttggaaaagatgcgaat
ttgcaaactttagcaagaggtgtaaatactgttactttggatacaggaagtaaagagctt
attgatttacatgccaaactttttgctaagcatggcactacaacaattagaaatttcgat
gctttaaacgatgtaaataatcttaaattcagtggagaatgtattaaaaaatacggctta
aaacatgaaatcacaattactttaatggatttaccaccaaattgtcaaggtgcccacgat
gtaccattttatgaaagaatattaaaagaaattttagctgctgaaattccttttgatagt
atttgttttaaggatgctagcggaacttcaaatccaaataaaatttatgaaaccattaaa
atggctagaaaaaatttaccacaagatgtgcatataagacttcatacgcatgaaactgca
ggagtgagtatagcttgttatttagcagcattggaagctggggttgatggtatagattta
gcagcagctcctgtgagtgggggtacttcacagcctgatattttaactatgatgcatgct
ttaaaaggtaaaaattatgatttgggtggattagaagaagaaaagattttaaaatatgaa
gcagttttaaaagattctttaaaagagtattttttaccgcctgaagctacaatggtaagt
cctttaatcccattctctcctatgccaggaggagctttaactgccaatactcaaatgatg
agggataataatatactcgataaattcccagaagttattcatgctatgcgtgaagttgtg
gaaaaaggtggttttggaacttctgtaactcctgtttctcaattttattttcaacaagct
tttaacaatgtcatgtttggatcttgggaaaaaattgctgaaggttatggaaaaatggta
ttgggatattttggtaaaactcctgtcgagcctgatgctgaagttaaaaaacttgcagct
aaacagctaaatttagagcccactacagaacttgctatcgatatagcggataaggatgaa
accaaaagtatagcttatgttaagagtttacttgaaaaagagggcatagcagtaagcgag
gaaaatattttcattgcagcagcttgtaaagaaaaaggtatagcgtatttaaaaggtgaa
gctaaagttaatgtgcgcaagaatgtgtctgcgccaaaacaaaattctactggtattgat
gagaataaatttacagtttcagttaatggaaacaaatatcatgtagaaataagtgcaggc
tttgataaagatgtaaatattaaaagtattcacaaagcagatactcaagaagatataatg
caagatgcggattcaagcgaaggtatacaagctggaatttcgggtaatgtatttaaaatt
tatattaatgaaggtgaagaggtaaaatcgggtcaagttgttatgattttagaagctatg
aaaatggagatagaagttagtgcaccaaaagatggcataatagaaaaaatttgtgtcaag
acgggtgatagtgttagcgaaaataatttagtcgcaatatataaaaataattga
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