Campylobacter coli RM1875: YSQ_04660
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Entry
YSQ_04660 CDS
T03164
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ccf
Campylobacter coli RM1875
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccf03032
]
YSQ_04660
03036 Chromosome and associated proteins [BR:
ccf03036
]
YSQ_04660
03400 DNA repair and recombination proteins [BR:
ccf03400
]
YSQ_04660
DNA replication proteins [BR:
ccf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YSQ_04660
Chromosome and associated proteins [BR:
ccf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
YSQ_04660
DNA repair and recombination proteins [BR:
ccf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
YSQ_04660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHK73267
LinkDB
All DBs
Position
890220..890510
Genome browser
AA seq
96 aa
AA seq
DB search
MTKADFISQVAQTAGLTKKDATAATDAVISTITDVLAKGDSVSFIGFGTFSTAERAAREA
RVPSTGKTIKVPATRVAKFKVGKNLKDAVAKAKKKK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatttcatttcgcaagttgctcaaactgctgggctaacaaaaaaagat
gctactgctgctactgatgcagttatttctactatcactgatgtattggctaaaggtgat
agcgttagctttataggttttggtactttctcaacagccgaaagagccgcaagagaagca
agagtgccaagtactggtaaaaccattaaggttcctgcaacaagagttgctaaatttaaa
gtgggtaaaaaccttaaagacgctgttgcaaaagctaaaaagaaaaaataa
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