Campylobacter coli RM1875: YSQ_05055
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Entry
YSQ_05055 CDS
T03164
Name
(GenBank) family 4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YSQ_05055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccf03400
]
YSQ_05055
Enzymes [BR:
ccf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YSQ_05055
DNA repair and recombination proteins [BR:
ccf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YSQ_05055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Syja_N
Motif
Other DBs
NCBI-ProteinID:
AHK73334
LinkDB
All DBs
Position
964260..964868
Genome browser
AA seq
202 aa
AA seq
DB search
MIRTLHYLKAMGYDFTDENLKLHSKIENFKDLRKNIQECTLCHFSKSRCFTLMENEIKNA
SLMIVDTLAHKNENEKGVLLNSKKGERLKFYLKEILGLCEKEFYFSYLFKCFSNGKFDDF
SLQSCLPFFWNELELVQPKMILCLGEYPFKSLGFSDFNVLRGEIFAYKNFFIMASFELEF
IEKNPSCEKIFIQDLKKIKGFL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgataagaactttacattatctaaaggccatgggttatgattttacggatgaaaattta
aaactccattcaaaaatagaaaattttaaagatttaagaaaaaacattcaagaatgtact
ctgtgtcatttttccaaatcacgctgctttacgcttatggaaaatgagataaaaaatgcc
tctcttatgatcgttgatacactagcgcataaaaatgaaaatgaaaaaggagttttgtta
aattcaaaaaaaggagaaagattaaaattttatctcaaagaaattttaggactttgcgag
aaagaattttatttttcttatctttttaaatgtttttctaatggaaaatttgatgatttt
tcgctacaatcttgcttgccatttttttggaatgagttagaacttgtccagcctaaaatg
attctttgtttaggtgagtatccttttaaaagcttgggtttttcagactttaacgttctt
agaggagaaatctttgcttataaaaatttctttataatggcaagttttgagcttgaattt
atagaaaaaaatccaagctgtgaaaaaatttttatacaagatctaaaaaaaattaaagga
tttttatga
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