Campylobacter coli RM1875: YSQ_05195
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Entry
YSQ_05195 CDS
T03164
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ccf
Campylobacter coli RM1875
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccf01011
]
YSQ_05195
Enzymes [BR:
ccf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
YSQ_05195
Peptidoglycan biosynthesis and degradation proteins [BR:
ccf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
YSQ_05195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
AHK73359
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Position
986953..988584
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AA seq
543 aa
AA seq
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MVRKILILLSLSLVFLNASPYNLERLKQEENSIAKDYYIYRLLEKKIISKKEAEGLNSHI
FRYVGKIKSELEKIIPVKIFIDPKYGPCYNYTKVNILDANQTCQSIRLNSIAFIASLDNA
SRSALAQKLSHQRGDLANLLLAFNTPEPIAYIIQKEDVNGFFRLRNYSKKYDFDLNASFA
NKLPTHVGFKNFAQNIIIKKENPKFRASMLKIDPTFVNEDSAFYLGINALAYNKEELAYN
FFAKAAQTFKMQSNKDNAIFWMWMIKKDDKDLQTLAKSSSLNIYSLYAKELTNSEFLKIE
VIDSTNKKKNNFNMQDPFAWQKLNKQIREADASELDRLAKEFDSKETLPIYAYILERKSK
FKNHYFIMPYYEYIKDYSAPRQALILAIARQESRFIPTAISVSYALGMMQFMPFLANHIG
EKELKIPNFDQDFMFEPKNAYYFGNHHLNYLEKHLKSPLFIAYAYNGGIGFTNRMLARDD
MFKQGKFEPFLSMEFVPYQESRIYGKKVLANYIVYRRLLNDSIKISDIFENLTQNKAGDL
NKS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
attgtgagaaaaatacttatcttacttagcttaagcttagtatttttaaatgctagcccc
tataatttagaaagattaaaacaagaggaaaattccatagctaaagattattatatctat
cgtcttttagaaaaaaaaataataagtaaaaaagaggctgaaggcttaaattctcatatc
ttccgctatgtaggtaaaatcaaatccgaacttgaaaaaataattcctgtaaaaattttc
atcgatcctaaatacggtccatgctacaactacacgaaggttaatatactcgatgcaaat
caaacttgccaaagtataagattaaactcaatagcctttatagcaagccttgataatgct
agccgaagtgccttagctcaaaaacttagtcatcaaagaggcgatttggctaatttactt
ttagcttttaacactcccgaacctatagcttatatcattcaaaaagaagatgttaatggt
ttttttagacttcgtaattattctaaaaaatatgattttgatttaaatgctagttttgct
aataagctgccaactcatgtaggatttaagaattttgcacaaaatattatcataaaaaaa
gaaaatcccaaatttagggcttcaatgctaaaaatagatccaacatttgtaaatgaggat
tctgctttttatttaggcattaatgccttagcctacaacaaagaagaactggcttacaat
ttctttgccaaagcagcacaaacttttaaaatgcaaagtaacaaagacaatgctatattt
tggatgtggatgattaaaaaagatgataaagatttgcaaactttagccaaaagctcttct
ttaaatatctatagtctttacgctaaagaattaacaaattctgaatttcttaaaatcgaa
gtcatagattctacaaataagaaaaaaaacaatttcaatatgcaagatccttttgcatgg
caaaaactcaacaaacaaattcgcgaagctgatgcaagcgaacttgatagattggctaaa
gaatttgactcaaaagaaactctgcctatctatgcttatatcttagaaaggaaatcaaaa
tttaaaaaccattattttataatgccttattatgaatacattaaagattatagcgcccca
agacaagcgcttatcttagccattgctagacaagaaagccgttttatccctactgcgata
tcggtttcttatgctttaggtatgatgcaatttatgccatttttagccaatcatatcggc
gagaaagaattaaaaattccaaattttgatcaagattttatgtttgagccaaaaaatgcc
tattattttggaaatcatcatttaaattatttagaaaaacatttaaaatctcctcttttt
attgcttatgcttataatggaggcataggctttaccaatcgtatgcttgcaagagatgat
atgtttaaacaaggcaaattcgaacctttcttgtctatggaatttgttccttatcaagaa
agtcgaatttatggaaaaaaagtattggctaattatattgtgtatcgacgtcttctgaac
gatagtataaagatttcggatatttttgaaaatttaactcaaaacaaggcaggtgattta
aacaaatcttag
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