Campylobacter coli RM1875: YSQ_05270
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Entry
YSQ_05270 CDS
T03164
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccf
Campylobacter coli RM1875
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccf03016
]
YSQ_05270
Enzymes [BR:
ccf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
YSQ_05270
Transfer RNA biogenesis [BR:
ccf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSQ_05270
Prokaryotic type
YSQ_05270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHK73373
LinkDB
All DBs
Position
complement(1003548..1004270)
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AA seq
240 aa
AA seq
DB search
MKLKIIFSYDGSKFLGSATQPHKKSVQDALQDALSHLGIFSSVLMASRTDKGVHASYAVA
CVECGEHFRDLNYLKKQINKFSHPFIYVKNLKIMPSNFEVRYDVKSREYRYIFYHGVYNP
FLASYVHFYPFIDVLKADLVLQNFVGIKDFKFFCKSGGDNKTTIREIFLAKAYSYKDFTI
FRFKANGFLRAQIRLMVASVLKVLENKMSIEELKEQIEAKKQYNRFLAPPCGLYLSRISY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaattattttttcctatgatggatcgaaatttttaggttcagctacccaa
cctcacaaaaaaagcgttcaagatgccttgcaagatgccttaagtcatcttggaattttt
tcctctgttttgatggcttctcgcacagataaaggggtgcatgcaagctatgctgttgct
tgcgtggaatgcggggagcattttagggatttaaactatcttaaaaaacaaatcaataaa
ttttctcatccttttatatatgttaaaaatttaaaaatcatgccttcaaattttgaagta
agatacgatgtaaaaagtagagaatatcgctatattttttatcacggggtttataatcct
tttttagcttcttatgttcatttttatccttttattgatgttttaaaggctgatcttgtt
ttgcaaaattttgtaggtattaaggattttaaattcttttgcaagagcggaggagataat
aaaacgactatcagagaaatatttttagctaaagcgtattcttataaggattttaccatt
tttcgttttaaggctaatggttttttaagggcgcaaataagactaatggttgcgagtgtt
ttaaaagttttagaaaataagatgagtatagaagagttaaaagagcaaatcgaagctaaa
aaacaatacaatcgttttttagccccgccttgtgggctttatctgagtagaatttcttat
tag
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