Campylobacter coli RM1875: YSQ_05385
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Entry
YSQ_05385 CDS
T03164
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YSQ_05385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccf02000
]
YSQ_05385
Enzymes [BR:
ccf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
YSQ_05385
Transporters [BR:
ccf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
YSQ_05385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
SbcC_Walker_B
nSTAND3
AAA_29
PigL_N
AAA_30
AI-2E_transport
DEAD
MMR_HSR1
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AHK73395
LinkDB
All DBs
Position
complement(1023789..1025522)
Genome browser
AA seq
577 aa
AA seq
DB search
MHKDMTLKDVLIRFKPFYKKYKKEFAIAIFGMILTSIGTAGSFASLKPILDYIFVEKNEA
LLYTLPFLLVIIYILKNLGFYLQTYYLSFIGMDTLRILRFKVLKNLLKLDMDFFKRNRTG
ELVSRCTNDINALQSIVSNIIPDFFRELLTIVGLLIVVFYQSPILAFFALVVLPCAILPL
VHFARKLKKYARSIQETNSDLLSRLSEIFSNIELIKASNTQNKESEKFAKQNNELCRLNL
KSTRIDALTSPLMEIIGSLGVAAVIIIGGREVIHGTMSVGSFFAFITALFAIYTPLKRLS
SLYGRLQGAIAASERTFYLLDLEPQILNGSKNLESIARIEFKQVDFAYENPYKSVLKDIN
FEFNKGEILALVGTSGGGKSSIINLLMRFYDKQKGEILLNDLDISEFSIESLHDRIGLVT
QNIYLFNDSFAENVAYSEEPNKEKIIKALKLANAYEFVQEMGGIYAEIKEHGKNLSGGQK
QRIAIARALYKNPDLLIFDEATSALDNESEKAIIETIENLKKDRLVLMIAHRLSTIENAD
KIAVIDQGQMIAIGSNEELLQSCELYQKFKNKEVDKV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagatatgactcttaaagatgttttaatccgttttaagcctttttataaaaaa
tacaagaaagaatttgccattgctatttttgggatgatacttactagtataggaacagct
ggaagtttcgcatctttaaagcctattttagattatatttttgttgaaaaaaatgaggcc
ttgctctataccttaccttttctacttgttattatttatattttaaagaatttgggtttt
tatttacaaacttattatttaagttttataggaatggatactttaagaattttgcgtttt
aaggttttaaaaaatcttttaaagcttgatatggatttttttaaacgcaacagaaccgga
gagctagtaagtcgttgcactaatgatattaacgctcttcaaagcatagtttctaatatc
attcctgatttttttagagagcttttaaccattgtgggtttattgatagtggtattttat
caaagtcctattttggctttttttgctctagtagttttgccttgtgcgattttgcccttg
gtgcattttgctagaaaattaaaaaaatacgctagaagtatacaagaaacaaattctgat
ttgctttcaagactgagtgaaattttttcaaatattgagcttattaaggcgagcaatact
caaaacaaagaaagcgaaaaatttgccaaacaaaacaacgagctttgtcgtttgaattta
aaatccactcgcattgatgctctaactagtccacttatggagattattggatcgcttgga
gtggctgcggtaattatcatcggaggaagagaagtgatccatggtacgatgagcgtgggt
agtttttttgcttttattacagcactttttgctatttatacacccttaaaaagattatct
tcgctttatggtagactacaaggcgcaatagcagcaagcgagaggactttttatttgctt
gatttagagccacaaattctaaatggaagtaaaaacttagaaagtatagcaaggattgaa
tttaaacaagtagattttgcttatgaaaatccttataagagtgttttaaaagatattaat
tttgaatttaacaagggtgaaattcttgcacttgttggaacaagcgggggtggaaaatca
tctatcatcaatcttttaatgcgtttttatgataagcaaaagggtgagattttattaaat
gatctagatatcagtgaatttagcatagaaagcttgcatgatagaataggccttgtaaca
caaaatatttatctttttaacgacagctttgctgaaaatgtagcctacagcgaagagcct
aataaagaaaagattatcaaagctttaaaactagccaatgcttatgaatttgtccaagaa
atgggaggaatttatgcagagataaaagagcatggtaaaaatttaagcgggggtcaaaaa
caacgcattgccatagctagagccttgtataaaaatcctgatttgcttatttttgatgaa
gcaacttcagctcttgataatgaaagtgaaaaagccatcatcgagactatagaaaattta
aaaaaagatagacttgttttaatgattgcccatcgtttaagcactatagaaaatgcagac
aagatcgcagtgattgatcaggggcaaatgattgctataggaagcaatgaagagcttttg
caaagttgcgaactttatcagaaatttaaaaacaaagaagtagataaagtctag
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