KEGG   Campylobacter coli RM1875: YSQ_05805
Entry
YSQ_05805         CDS       T03164                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ccf  Campylobacter coli RM1875
Pathway
ccf02024  Quorum sensing
ccf03060  Protein export
ccf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ccf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    YSQ_05805
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YSQ_05805
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YSQ_05805
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ccf02044]
    YSQ_05805
Enzymes [BR:ccf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     YSQ_05805
Secretion system [BR:ccf02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   YSQ_05805
  Eukaryotic Sec-SRP protein
   YSQ_05805
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_22 AAA_31 6PF2K AAA_30 YqeC nSTAND3 Zeta_toxin AAA AAA_19 AAA_17 DUF6471 AAA_14
Other DBs
NCBI-ProteinID: AHK73473
LinkDB
Position
complement(1108615..1109952)
AA seq 445 aa
MFELVSESFKSAINKLRFVDDEKALKNALDTLKKALLKADVHHKVVKDLLLLIEEDVKKN
GIGQKQFLEAIKTNLENILNADGKNQGFVFATKPPTVVLMVGLQGGGKTTSTVKLANYLK
LRNKKVLIAACDLQRLAAVEQLKQLCEANELDLFYIENEKDPIKVAQQALEKAKNSMADV
LLVDTAGRLAIDEALMNELKAVKNVLNPDEIFYVADAMSGQDGVKTASSFNELLGITGVI
LSKFDADTKGGIALGITKQIGIPLRFVGVGEKIADLEIFIPERIVNRIMGEGDLATLAEK
TAAIIDEKEAKKLNQKIKKGEFNFNDFLTQMESVKKLGSMKSIIGMIPGLSNVASSVKDL
DLDNSKEIIHIKAMISSMTPKERENPDLLNNARKRRIAEGAGLSQVEVNRFLKQFANAAK
LAKRFSGKKGMDSLMQMMNQARRQF
NT seq 1338 nt   +upstreamnt  +downstreamnt
gtgtttgaattagtcagcgaatcttttaaatcagcgattaataaacttcgttttgttgat
gatgaaaaagcgcttaaaaatgctttagataccttaaaaaaagccttactaaaagcagat
gtacaccataaagtggttaaagatttgcttttgcttattgaagaagatgttaaaaaaaat
ggcataggacaaaagcaatttttagaagctattaaaaccaatttagaaaatattttgaat
gctgatggaaaaaatcaaggttttgtttttgctactaagcctccaactgttgttttaatg
gtgggtctacaaggtggaggtaaaaccacaagtacggttaagcttgccaactatctaaaa
cttcgcaataaaaaagttttaatagctgcttgtgatttacagcgtttggctgcagtagag
caacttaaacagctttgtgaagctaatgagttagatcttttttatatcgaaaatgaaaaa
gatccgattaaagtggcacaacaagctttagaaaaagcaaaaaattctatggcagatgta
ttgctagtcgatactgcaggaagattggctattgatgaggctttaatgaatgaattaaaa
gcggtaaaaaatgttttaaatccagatgaaattttctatgtcgctgatgctatgagtgga
caagatggtgttaaaacagcctcaagtttcaatgagcttttgggtattacaggagttatt
ttatctaaatttgatgcagataccaaagggggtatagctttaggtattacgaagcaaatt
ggaatccctttaagatttgtaggcgtgggtgaaaagatagcggatttagaaatttttatt
cctgaaagaatagttaatcgtataatgggtgaaggcgatttggcaactttagctgaaaaa
actgcggccattatcgatgaaaaagaggctaagaaattaaatcaaaaaatcaaaaaaggc
gagtttaatttcaatgattttttaactcaaatggaaagtgttaaaaaattgggtagtatg
aagtctattataggaatgatacctggactttctaatgttgcttcaagtgtaaaagatctt
gatttggataattctaaagaaattatacatattaaagccatgatttcatctatgacgcca
aaagaaagagaaaatccagatttacttaataatgctagaaagcgtcgtatagcagaaggc
gctggattgtctcaagttgaagttaatcgctttttaaaacaatttgcaaatgctgctaaa
cttgctaagagattttcaggaaaaaagggtatggatagtttaatgcaaatgatgaatcaa
gctagaagacaattttag

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