Campylobacter coli RM1875: YSQ_05955
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Entry
YSQ_05955 CDS
T03164
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YSQ_05955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccf03400
]
YSQ_05955
Enzymes [BR:
ccf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YSQ_05955
DNA repair and recombination proteins [BR:
ccf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YSQ_05955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
nSTAND3
AAA_19
AAA_30
Zn_ribbon_6
PWI_ABCF3
Rsd_AlgQ
PhoH
IBR_1
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
AHK73503
LinkDB
All DBs
Position
complement(1139734..1141572)
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AA seq
612 aa
AA seq
DB search
MRYYELAVFGFYLQNLTFHSKEEIPALREVIIDLKNKKNLRALVLKECQKPEFQTKEIKE
ITSFSLSCVQFELAKFISYYYSSKLGFVLGLFSTYQTYTCDLIKIENEPKLSQKQKEALE
FIKANPTSLLFADTGSGKTEIYICLIKQYLEQGKQVLLLMPEISLTPQMQKRLEVYFKDK
FFLWHSKISKKKKQENLERFCKGEALLVAGARSALFLPFVNLGLIIVDEEHDNSYKASNQ
PYINARDLALFLGSKFDIKVLLGSATPSLTSFYKQKSFRLKGTFFESKKHFLYDENELDI
TPMLLGELKKSLENQKQAIIFLPARANFRQIVCKDCGQTIKCPFCSIAMSLHKKRNVLKC
HYCNYTSLIEQNCPSCQGAMLEARKMGTAELQELLQEALPLARIAKFDSDEITSIRKLNA
VLKDFNENKIDILIGTSMLAKGHDYHSVDLSVILGLDEYLFRPNFKASEETLALAMQVAG
RAGRKGEGRVLLQTKNRNFFERYIEDYDSFLQDELENRKDLYPPFKRLLRIVIEDKEQKQ
AQNLCQKLVDQISGTLKVEIIGYGACSIEMLKGQYRFYILLRSDFYKVLIKIQEYALNFK
NVSVDIDPIDFL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagatattatgaattagcggtttttggattttatttgcaaaatttaacctttcatagt
aaggaagaaattccagctttaagagaggtgattattgatttaaaaaataaaaaaaatctt
agagctttagtattgaaagaatgccaaaagcccgaatttcagacaaaagagattaaagaa
attacatctttttcattaagctgtgtacaatttgaattggcgaaatttatttcgtattat
tattcttcaaagctaggttttgtattaggacttttttctacttatcaaacttacacttgt
gatctgattaaaatagaaaatgaacccaaattaagccaaaaacaaaaagaagctttggaa
tttataaaagctaatcccacttctttgctttttgcagatacaggtagtggaaaaactgaa
atttatatttgcttaataaaacaatatttagagcaaggaaaacaagttttacttttaatg
ccagaaatttctcttactccacagatgcaaaagcgcttagaggtgtattttaaagataaa
ttttttctatggcattctaaaatttcaaagaaaaaaaagcaagaaaatttagagcgtttt
tgcaagggtgaagcacttttggtcgcaggagcaagatcggctttatttttaccttttgta
aatttagggcttattatagtggatgaagagcatgataattcttacaaagcgtctaatcaa
ccctatattaatgctagagatttagcgctttttttaggctcgaaatttgatatcaaagtg
cttttgggctcagctactccttctttaacgagtttttataagcaaaagagttttaggctt
aagggtactttttttgaaagcaaaaaacattttttatatgatgaaaatgaactagacata
actcctatgcttttaggtgagttgaaaaaaagcttggaaaatcaaaagcaagctatcatt
ttcttacctgctagggctaattttagacaaattgtatgtaaagattgtgggcaaactata
aaatgtcctttttgttctattgctatgagtttgcataaaaaaagaaatgttttaaagtgt
cattattgtaattatacttctttaatagagcaaaattgtcctagctgtcaaggtgcaatg
ctagaggctaggaagatgggcacggcagaattgcaagagcttttgcaagaagctttacct
ctagcaaggatagccaaatttgacagcgatgagattacgagtattcgaaagcttaatgct
gttttgaaagattttaatgaaaataagatcgatatacttataggaacttctatgcttgct
aaaggacatgattatcatagtgtggatttgagtgttatcttggggcttgatgagtatcta
tttcgacctaattttaaggcaagtgaagaaactttagctttggctatgcaagtagcagga
agagcagggcgcaaaggtgagggaagggtacttttgcaaactaaaaataggaatttcttt
gaaagatatatagaggattatgatagctttttgcaagatgaattagaaaacagaaaagat
ctttatcctccttttaagcgtcttttgagaattgtcatcgaagataaagaacaaaagcag
gctcaaaatttatgtcagaaattagttgatcagattagtggcactttaaaagttgaaatc
ataggatatggagcttgcagcatagaaatgctaaaaggacaatatcgtttttatatattg
cttcgtagtgatttttataaggtcttaattaagatacaagaatatgctttaaattttaaa
aatgttagtgtagatatagatcctattgattttttatag
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