Campylobacter coli RM1875: YSQ_07875
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Entry
YSQ_07875 CDS
T03164
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf00260
Glycine, serine and threonine metabolism
ccf00460
Cyanoamino acid metabolism
ccf00630
Glyoxylate and dicarboxylate metabolism
ccf00670
One carbon pool by folate
ccf00680
Methane metabolism
ccf01100
Metabolic pathways
ccf01110
Biosynthesis of secondary metabolites
ccf01120
Microbial metabolism in diverse environments
ccf01200
Carbon metabolism
ccf01230
Biosynthesis of amino acids
ccf01240
Biosynthesis of cofactors
ccf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YSQ_07875
09102 Energy metabolism
00680 Methane metabolism
YSQ_07875
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YSQ_07875
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
YSQ_07875
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
YSQ_07875
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
YSQ_07875
Enzymes [BR:
ccf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
YSQ_07875
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AHK73841
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Position
complement(1475178..1476422)
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AA seq
414 aa
AA seq
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MSLEQFDKEIFDLTNQELVRQCEGLEMIASENFTLPEVMEVMGSVLTNKYAEGYPGKRYY
GGCEFVDEIENLAIERCKKLFNCSFANVQPNSGSQANQGVYAALLNPGDKILGMDLSHGG
HLTHGAKVSSSGKMYESFFYGVELDGRINYEKVREIAHIVKPKLIVCGASAYARIIDFSK
FREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVVSSTTHKTLRGPRGGIIMTNDEE
LAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSEEWKIYAKQVRSNAQALAKVLMDRKY
KLVSDGTDNHLVLMSFLEREFSGKDADLALGNAGITANKNTVPGETRSPFVTSGLRLGTP
ALTARGFKENEIQIVANYIADILDDIQNTHLQKEIKEKLKTLASNFIIYEKAMF
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagagcagtttgataaggaaatttttgatttaactaaccaagagttagtgcgc
cagtgcgaaggtcttgaaatgatagcaagtgagaatttcactttgcctgaagtaatggaa
gtaatgggaagtgttttaactaacaaatatgcagaaggttatccaggtaagagatattat
ggaggctgtgaatttgtagatgaaatcgaaaatttagctatagaaagatgtaaaaaactt
tttaattgtagttttgcaaatgtgcaacctaattcaggttctcaagctaatcaaggcgtt
tatgctgcacttttaaatccaggtgataaaattttaggaatggatttaagtcatggtgga
catttaacacatggtgcaaaagtaagctcatcgggaaaaatgtatgagagctttttttat
ggtgtagagcttgatggaaggataaactatgaaaaagttagggaaattgctcatattgta
aaaccaaagcttatcgtgtgcggtgcgagtgcttatgctcgtattattgacttttcaaaa
tttagagagattgcggatgaagttggagcttatctttttgcagacattgcacacattgct
ggacttgttgtagcaggtgagcatccaagtccatttcctcatgctcatgtagtaagctct
acaacccacaaaaccttacgtggtccaagaggcggtatcatcatgactaatgatgaagag
cttgctaaaaaaattaattcagctatttttccaggtatccaaggtggaccattgatgcat
gttattgcagctaaagccgtgggatttaaatttaatcttagtgaagaatggaaaatttat
gctaagcaagtaagaagcaatgcgcaagctttagctaaagttttaatggatagaaagtat
aagcttgtaagtgatggaacagataatcatcttgtattgatgagctttttagagcgtgaa
tttagcggaaaagatgcggatttggctttgggtaatgcaggaattacagcaaataaaaat
accgtgcctggcgaaactagaagcccatttgtaacaagtggattaagattaggaacgcct
gcccttacggctagaggttttaaagaaaatgaaattcaaatagttgctaactatatagct
gatattttagatgatattcaaaatactcatttgcaaaaagaaattaaggaaaaactcaaa
acccttgcaagtaattttataatctatgaaaaggcaatgttttga
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