Campylobacter coli RM1875: YSQ_09805
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Entry
YSQ_09805 CDS
T03164
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf00290
Valine, leucine and isoleucine biosynthesis
ccf00660
C5-Branched dibasic acid metabolism
ccf01100
Metabolic pathways
ccf01110
Biosynthesis of secondary metabolites
ccf01210
2-Oxocarboxylic acid metabolism
ccf01230
Biosynthesis of amino acids
Module
ccf_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
YSQ_09805
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
YSQ_09805
Enzymes [BR:
ccf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
YSQ_09805
4.2.1.35 (R)-2-methylmalate dehydratase
YSQ_09805
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
AHK74196
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All DBs
Position
complement(1799362..1800768)
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AA seq
468 aa
AA seq
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MAKTLYEKVFDSHVVYQKENELPILYIDRHLIHEVTSPQAFSGLKMANRKMARSDLTLAT
IDHDVSTKSTDLDACSGMAKEQITTLMQNTKEFGVRLLGLGDKNQGIVHIVSPELGFTLP
GVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTLKQAKLKTMKIECKGQFQKGVYA
KDLILYLISKYGTAKGTGYAIEFCGELIEGLSMEARMTLCNMAIEFGAKVGMIAPDEITF
EYIKGKEFAPKGEEFEKHCEYWRSLKSDEGAQYDESIVLDASQIQPQISYGTNPSQVIAI
NERIPKVSDFINPSDQKSLLDALDYVNLEQDQSLEGVKIDIVFIGSCTNGRLEDLKIAAD
ILKGRKIHKDVKALIVPGSMQVRKEAENLGLDKIFIEAGCEWRYAGCSMCLGMNDDKASA
GQRVASTSNRNFVGRQGKGSITHLMSPASAAACAIEGVICDNRKYLGV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaactttatatgaaaaagtgtttgattctcatgtggtttatcaaaaggaaaat
gaacttcctatactttatatcgatagacatttaatccacgaagtaacaagccctcaagct
ttttcaggtcttaaaatggcaaatcgtaaaatggcaagatcggatttgactttagcaact
atagatcatgatgtatcgactaaaagcacagatttggatgcttgttcaggtatggcaaaa
gagcaaattacgactttgatgcaaaatactaaagaatttggagtcagacttttaggccta
ggcgataaaaatcaaggtatagtgcatatagtaagtcccgagcttggttttactttaccg
ggtgtaactttggtttgtggggattctcacactgcaacacacggggcctttggagctttg
gcttttggtataggcacaagcgaggtcgagcatgtaatggctacgcaaactttaaaacaa
gcaaaacttaaaactatgaaaatagaatgcaagggtcagtttcaaaagggtgtttatgct
aaggatttgattttatatcttatatcaaaatacggtaccgcaaaaggcacaggctatgct
atagaattttgtggagagttgatagaaggcttgagtatggaagctagaatgacactttgc
aatatggctatagaatttggagcaaaagtcggtatgatagctcctgatgagattactttt
gagtatataaaagggaaagaatttgctccaaagggagaagaatttgaaaagcattgtgag
tattggagaagtttaaaaagcgatgagggcgcacaatatgatgaaagtatagtccttgat
gcaagccaaattcaaccgcaaatcagctatggaactaatccttctcaagttattgctata
aatgaaagaattccaaaagtcagcgattttatcaatccaagcgatcaaaaatctttactt
gatgctttagattatgtgaatttggagcaagatcaaagcttagaaggggtaaaaatcgat
attgttttcataggttcttgtacaaatgggcgtttagaagatcttaagatagctgcggat
attttaaaagggcgtaaaattcacaaggatgttaaagctttaatcgtgcctggttctatg
caagtgagaaaagaagctgaaaatttaggacttgataaaatttttatcgaagcagggtgt
gagtggagatatgcagggtgttcaatgtgtcttggtatgaatgatgataaagcaagtgcg
ggacaaagagttgcttcaacttcaaatcgtaattttgtaggcagacaaggtaaaggttct
atcacccacttaatgagtcctgcaagcgcagcagcctgtgccatagaaggcgttatttgt
gataatagaaaatatttaggagtttaa
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