Chlorobium chlorochromatii: Cag_0075
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Entry
Cag_0075 CDS
T00290
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cch
Chlorobium chlorochromatii
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cch03032
]
Cag_0075
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_0075
Enzymes [BR:
cch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cag_0075
DNA replication proteins [BR:
cch03032
]
Prokaryotic type
DNA Topoisomerases
Cag_0075
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cag_0075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_InsA
Toprim_4
Toprim_2
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
ABB27354
UniProt:
Q3ANX7
LinkDB
All DBs
Position
complement(83182..85578)
Genome browser
AA seq
798 aa
AA seq
DB search
MASSVAALSAKNKTLIVVESPSKAKTINKYLGSNYTVFASVGHIKDLPKKEIGLDFEHNY
SPRYEIIPGKEKVVKQLKKLATEASNILIATDPDREGEAIAWHIANEIEHAKAPVARVLF
NEVTKKAILEAIEKPRHIDLRLVHSQQTRQGLDKIVGYKISPFLWKVVLRGLSAGRVQSV
ALRLICEREEEIERFVIQEYWTIAADFLTANKESFRARLVRLDGDKPEITNVEQAEAIAA
IAKKGNYSVREITPRIQQRKQPLPFTTSLLQQAASNQLGFGAQRTMRTAQQLYEGIELGA
EGAMGLITYMRTDSTRISPEAVGEARNYIERNFGKDYVGAGSSGKPGKNAQDAHEAIRPT
SLLKTPEQVKPYLSADQFKLYELIWKRFLAAMMAPAKIEQTKVDVEEQSGKFLFRANGSR
VLFPGFMRVYDDQQELAYEAQTSTKEEVENEMVVKLPEKLAVNDPLGLGALEQKQSFTRP
PARYSEASLVKDLDHFGIGRPSTYASIFSTLQDRRYVALEKRKIMPTDLGRDVAKILVAN
FPELFNVGFTAFMEDELDKVASGDDAYEKVLDSFYKPLTSALALRSATPLIPQNNEAETC
DKCGTGKMILKWTASGKFLGCSNYPKCKNIRTISSNREKPASTGVHCPSCEDGEMVLRKG
RLGPFLACSNYPKCNTLLNLNKQRHIEPPKTPPVVTDMACPKCGAPLYLRSGKRGLWLGC
SKFPKCRGRLAWTALEPAAQERWERVMAAHQKAHPPVTLKMVDGSTVSMTSSIDDIIMKA
DAAGLIAPAMDLVPEAEG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagtagcagcactctctgccaaaaataaaaccctcattgtggttgagtcg
ccgtcaaaggcaaaaaccattaacaagtatctcggcagcaactatacggttttcgcctcc
gtcgggcacattaaagatttaccgaaaaaagagattgggctcgactttgaacataactac
tcccctcgttacgaaattattcccggtaaagaaaaggtagtaaagcagcttaaaaaactt
gcgactgaagccagcaacattttgattgctactgaccctgaccgcgagggtgaagctatt
gcatggcacattgcgaacgaaatagaacatgccaaagcacccgttgcccgcgtgctcttt
aacgaagttaccaaaaaagccattcttgaggcaattgaaaaacctcgccatattgacttg
cgccttgtgcattcccagcaaacaaggcaggggctcgataaaattgtaggttataaaatc
agcccatttttgtggaaagtggtgctgcgtggattatcggcagggcgcgtacaatcggtg
gcgttacgccttatttgtgagcgtgaagaggagattgagcgctttgttattcaagaatat
tggactattgctgccgattttctaacggcaaacaaagaatccttccgcgcccgcttagtg
cgtttggatggcgataaacctgaaatcacgaatgtagagcaagcagaagctattgccgct
attgccaaaaaaggcaactacagcgttcgcgaaattactcctcgcattcaacaacgaaaa
cagccgctaccgtttacgacatcgttgttgcagcaagccgcctctaaccagcttggtttt
ggtgcacagcgcaccatgcgcaccgcccagcaactttacgaaggtattgaacttggtgct
gaaggtgctatgggtcttattacctacatgcgtaccgactccacacgcattagccccgaa
gcagttggcgaagcacgcaactacattgagcgcaattttggcaaagattacgttggagct
ggtagcagcggcaaacccggcaaaaatgctcaagatgcccacgaagccattcgccccacc
tcgctccttaaaacgcctgaacaggtaaaaccctacctctccgccgatcaattcaagctc
tatgaattaatttggaagcgctttcttgctgcaatgatggctcccgctaaaattgagcaa
acaaaggttgatgttgaggagcaaagcggcaaatttctttttcgagcaaatggaagccgc
gtactcttccctggctttatgcgcgtttatgacgatcagcaagagcttgcatatgaggca
caaacctccacaaaagaagaggtggaaaatgaaatggtggtaaaacttccagaaaaactt
gccgttaatgacccgcttgggcttggcgcattagaacaaaaacaaagctttacccgtcca
cctgctcgttacagcgaagcaagcttagtaaaagacctcgaccactttggcattgggcgc
ccatcaacctacgcctctattttttcaactttgcaagatcgccgctatgtggcacttgaa
aagcgcaaaattatgcccaccgatcttgggcgtgatgttgctaaaattcttgtagccaac
ttccccgaactctttaacgttggctttaccgcctttatggaggacgagcttgataaagtt
gcaagtggcgacgatgcgtatgaaaaagtgctcgatagcttttacaagcctctcacatca
gctttagcgcttcgcagtgccacgccactcattccgcaaaacaacgaagccgaaacatgc
gacaaatgcggcacaggcaaaatgattttaaaatggacagcaagcggcaaatttcttgga
tgctccaactatcccaagtgcaaaaacattcgcaccattagtagcaatcgcgaaaaaccc
gcatcaacgggcgtgcactgcccctcatgcgaagatggtgaaatggtgctccgcaaagga
cgacttggaccatttcttgcctgctccaactatcccaaatgcaatacgctgcttaaccta
aacaagcaacgccacattgagccaccgaaaacaccacccgttgttaccgatatggcgtgc
ccaaaatgcggtgccccactttacctccgcagtggcaaacgagggctatggcttggctgc
tcaaaattccccaaatgtagaggacgccttgcatggacagcgcttgagcctgctgctcaa
gagcgatgggaacgcgttatggctgcacatcaaaaagcacatccccccgttaccttaaaa
atggttgatggtagtactgtttcaatgaccagctcaattgatgatattattatgaaagct
gacgccgcaggattaattgctcccgcaatggatttagtgcctgaagcggagggatag
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