Chlorobium chlorochromatii: Cag_0179
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Entry
Cag_0179 CDS
T00290
Name
(GenBank) DNA polymerase A
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03030
DNA replication
cch03410
Base excision repair
cch03420
Nucleotide excision repair
cch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cag_0179
03410 Base excision repair
Cag_0179
03420 Nucleotide excision repair
Cag_0179
03440 Homologous recombination
Cag_0179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cch03032
]
Cag_0179
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_0179
Enzymes [BR:
cch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cag_0179
DNA replication proteins [BR:
cch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cag_0179
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cag_0179
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cag_0179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ABB27457
UniProt:
Q3AU68
LinkDB
All DBs
Position
complement(200023..202797)
Genome browser
AA seq
924 aa
AA seq
DB search
MAMLYRAFFALQRTGMSSPSGLPTGALYGFTTALLKIFENYHPHYLVAAFDSREKTFRHH
LLESYKANRAAPPEELLQQLEKLFELLKAFGVPVIKQAGYEADDLIGAMVTQFADVCRIG
IVTPDKDLAQLVREGVQILKPGKNQHELEPLGCNEVKAHFGVPPKQFTNFLTLTGDTSDN
IVGAKGIGPKTAATLLEKYQTLDKLYQHLDELTPKVRKSLEDFAPNRELVLQLVTICCDA
PLHVTLEELACKNPARDVVLPLLQELGFRTIAARLQAASVALTCACNDGGESAPPMQSDP
NSSNLLNGSDGNTSATDTAPPPSFPDVPRHYTLVETREQLQALLEELQQVTHIAVDTETT
SLDVFEAELAGISLCAEAGKAFFIATTPDALERKEVVKQLKPLLENPAITKSGQNLKYDM
LVLKKYGIELAPISFDTMLASYVLNPDEHHNLDDMALRYLGRTTTKYDELTGTGKQRRHI
FEVEKEALTNYACQDADVAFQLEEVLQAQLQAEPQLLALCTTMEFPLVRVLATMEYAGIA
IDTEHLARVAETTELELQSLTDNIYAAAGSSFNIDSPKQLSHVLFTDLSLPTGKSTKTGF
STDVGVLEELAATYPIASDLLSYRTLQKLKGTYIEALPKIINPRTGRIHTSFNQHITATG
RLSSSNPNLQNIPVRTALGKEIRRAFIPSTPEHWLLSADYSQIELRIAAELSGDERLIAA
FRNGEDIHTATAQVIFGTEEISSDMRRKAKEVNFGVLYGIQPFGLAKRLNIPQKEAKVII
ETYKAKYPQLFNVLRHIIEEGKEKGYVTTLLGRRRYIADLNSRNGTVQKAAERAAMNTPI
QGTAADIIKCAMNLCYQQMQASGMASEMLLQVHDELLFETTDSEKEALTKLVENAMKEAA
VLCGMKQVPVEVDCGVGKNWLEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgctttaccgtgctttttttgcgttgcagcgcacaggcatgagtagcccttcg
gggttgccaacgggtgcgctctacggctttaccacagcgttgcttaaaatttttgagaat
tatcatcctcactacttagttgcggcatttgatagccgcgaaaaaacctttcgccaccat
ttgcttgagagctataaggcaaatcgtgcagctccacctgaagagctgttacagcaactt
gaaaagttgtttgagttgttgaaagcttttggagtgcctgttattaagcaagcgggttat
gaagctgatgatcttattggcgcgatggttactcagtttgcggatgtttgccgcattggc
attgttacgcccgataaagatttagcgcagcttgtgcgcgaaggtgtgcaaattttaaag
ccggggaaaaatcagcatgagttagagccgcttggttgcaatgaggtgaaagctcacttt
ggcgttcctcccaaacaattcaccaattttttaaccttaaccggtgatacgtcggataac
attgtgggcgctaaaggcattggtccaaaaaccgccgcaaccttgcttgaaaaatatcaa
accttagataagctttaccaacacttggatgagttaacgccaaaggtgcggaaaagcctt
gaggattttgcaccgaatcgggagttggtgctgcaacttgttaccatttgctgcgatgcg
ccgctccatgttacgttagaggaacttgcttgcaaaaatcccgcacgagatgttgtgctg
ccgctcttgcaagagttgggcttccgtaccattgctgctcgtttacaagctgcgtccgtg
gcacttacatgcgcttgtaatgatgggggggaaagtgctccaccaatgcaaagcgatcct
aatagttccaaccttttaaacggaagtgatggcaatacttcggcaaccgataccgctccc
ccaccatcattcccagacgttcctcgccattacacccttgtagaaacaagagagcaattg
caggcgttgcttgaggagttgcaacaggttacgcatatagcggttgataccgaaaccaca
agccttgatgtttttgaagctgagctggcaggaatttcgctttgtgctgaagcgggtaaa
gcattttttattgccactacgcccgatgctcttgagagaaaagaggttgtcaagcaactc
aaaccactgcttgaaaatcccgcaattacgaaaagcgggcagaatttgaagtacgatatg
ctggtgctgaaaaagtatggcattgaacttgcacccatcagctttgataccatgcttgca
agttatgtgcttaaccccgatgagcaccacaatctcgacgacatggcactgcgttacctt
gggcgcaccaccaccaagtatgatgagcttacgggcacaggcaaacagcgccgccatatt
tttgaggtggaaaaagaggcactcaccaactacgcctgccaagatgccgatgtggctttt
caactggaagaggtgctgcaagcccaactgcaagccgagccgcaactgctggcactttgc
accactatggagttcccgcttgtgcgcgtgttagcaacaatggagtatgctggtattgct
attgataccgagcatcttgcccgtgtagccgaaaccaccgagctggaacttcaatcctta
acagacaacatttacgcggcggctggtagctcttttaatattgattcacccaaacagctt
tcgcacgtactctttaccgatcttagcttgccaacaggtaaatccaccaaaacaggcttt
tcaaccgatgttggcgttttggaggagttggctgcaacctaccccatcgcaagcgattta
ctgagctaccgcacgttgcaaaagttaaaaggaacctacattgaggcgctgccaaaaata
atcaatccacgcacaggacgcattcatacctcctttaaccagcacattaccgcaacgggc
aggctctcatcctcaaatcccaacctgcaaaacattcccgttcgcacggcgcttggtaag
gaaattcgccgcgcctttattccttcaacccccgaacattggctgctttcggctgattac
tcgcaaattgagctgcgcattgccgctgagctttcgggcgatgagcgcttgattgctgct
ttccgcaacggcgaggatattcacaccgcaacggcacaagtgatttttggaacggaggaa
attagtagcgatatgcgccgcaaagctaaagaggtgaactttggcgtgctctacggcatt
cagccttttgggttagcaaagcgcttgaacattccccaaaaagaggcaaaagttattatt
gaaacctataaagctaaatatccacagctctttaatgtgttgcgccatattattgaggag
ggaaaagaaaaaggctacgttaccacccttttggggcgacgacgctacattgctgacctt
aacagccgcaatggcaccgtacaaaaagctgccgaacgcgccgctatgaatacgcccatt
caaggtacagcggcagatattattaagtgcgctatgaacctttgttatcagcaaatgcaa
gcgtcaggcatggcttccgaaatgctcttgcaagtgcatgatgaattgctttttgaaacc
actgatagcgaaaaagaggcactaacaaagcttgtagaaaatgccatgaaagaggctgcg
gtgctttgcggcatgaagcaagtgccggtggaggttgattgcggagttggaaaaaattgg
cttgaagcccattga
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