Chlorobium chlorochromatii: Cag_0387
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Entry
Cag_0387 CDS
T00290
Name
(GenBank) RNA polymerase sigma factor rpoD (Sigma-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
cch
Chlorobium chlorochromatii
Pathway
cch02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cag_0387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cch03021
]
Cag_0387
Transcription machinery [BR:
cch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cag_0387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABB27660
UniProt:
Q3ATL5
LinkDB
All DBs
Position
complement(448296..449195)
Genome browser
AA seq
299 aa
AA seq
DB search
MRQLKISKQITNRESLSLDRYLQEIGKYDLLTAEDEVRLTKAIKEGFDMPVDTPEYKRAK
RALDKLIKGNLRFVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETRGFKFISYAVW
WIRQSILQALAEQSRIVRLPLNRVGTLNKISKAYSQLEQEYERDPNTRELASLLEMDSQD
VADTLKIAGRHVSVDAPFAQGDDNRLLDVLQNDGHMPDYGLTRDSLTLEVERSLSVLAPR
EADVIRSYFGIGMDNPLTLEEIGEKFRLTRERVRQIKEKAIRRLRQSAYSKVLKEYIGG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaactaaaaatcagtaaacaaataaccaatcgcgaaagcctctctctcgaccgc
tatttgcaagagattggtaaatatgatctgctcactgccgaagatgaggtgcgccttacc
aaagccattaaagagggctttgatatgccggttgacacccccgaatacaagcgggcaaaa
cgcgcacttgataagcttattaaaggcaatcttcgctttgtggtttcggtagctaagcaa
taccaaaaccaagggttaacgcttggcgaccttattaatgaagggaatcttggacttatt
aaagccgcaaaacgctttgatgaaacacgcggctttaaatttatttcctacgctgtgtgg
tggattcgccaatccattttgcaagctcttgctgagcaatcgcgcattgtgcgcttgcca
ctgaaccgcgttggtacgctgaacaaaatcagcaaagcatatagccaacttgagcaagag
tacgagcgcgatcccaacacacgcgaacttgcaagcttgcttgaaatggattcgcaagat
gttgccgacacgcttaaaattgccggacgccatgtgtcggttgatgcaccctttgcgcaa
ggcgacgacaaccgcttgcttgacgtgttgcaaaatgatggacatatgcccgattacggc
ttaacccgcgattctctaacgcttgaagttgaacgttcactttcggtgctcgctccccgc
gaagccgatgttattcgctcttactttggcattggtatggataatccgctaacgttggag
gagattggcgaaaaattccgtttaacccgtgaacgtgttcgccaaattaaagaaaaggct
attcggcggttacgccaatcggcatatagcaaagtgctcaaagagtatattggcggataa
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