Chlorobium chlorochromatii: Cag_0542
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Entry
Cag_0542 CDS
T00290
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cch
Chlorobium chlorochromatii
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cch03009
]
Cag_0542
Enzymes [BR:
cch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Cag_0542
Ribosome biogenesis [BR:
cch03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Cag_0542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ABB27815
UniProt:
Q3AT60
LinkDB
All DBs
Position
646079..646834
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AA seq
251 aa
AA seq
DB search
MYMKQEKSNNDGMRINRFLAMCGIASRRAADQLVQEGRVCINGKIVTTPGVKVNPSRDEV
IIDGKRFAQPENRKVYILLNKPRNVITTSSDERQREMVLDFIDVPERIFPVGRLDRKTTG
VILLTNDGELAHKLMHPSSGVKKEYIAELSERFPAAMLGKLTNGMRLKDTGEKVSPCRAK
LLDDGMRVLLSIHEGKNHQVRRMFDTLGFEVKRLDRVAYAGLQAGELRRGEWRYLSRNEV
RELYRISQEEA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgaagcaggaaaagagtaataacgatggcatgagaattaaccgctttcttgcc
atgtgcggcattgcctcgcgccgagcggctgaccaattggtacaggaggggcgagtttgt
attaatggcaaaattgttaccacaccgggtgtaaaggttaacccatcgcgtgatgaagta
attatagatggtaaacgctttgcacaacctgaaaatcgcaaagtctatatacttctcaac
aaaccccgcaacgttattaccacaagcagcgatgagcggcagcgcgaaatggtgctcgat
tttattgatgtgcctgagcgtatttttcccgttgggcgccttgatcgaaaaactacaggc
gttatactgctcaccaatgatggcgaattagcacataaattaatgcatccttcgtcggga
gtgaaaaaagagtatattgcggagcttagtgagcgttttcctgctgcaatgttaggcaaa
cttaccaatggtatgcgcctaaaagatacgggagaaaaggtaagcccctgccgcgccaag
ctgcttgatgatggtatgcgagtgcttttaagcattcatgaaggtaaaaatcatcaagtg
cgccgcatgttcgatacgctgggttttgaggtcaagcgccttgaccgcgtagcctatgcg
gggttgcaagcgggcgaattgcgccgtggggagtggcgctacctaagccgtaacgaagta
cgggaactttaccgcatatcgcaagaggaggcgtaa
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