Chlorobium chlorochromatii: Cag_0763
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Entry
Cag_0763 CDS
T00290
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cag_0763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_0763
Enzymes [BR:
cch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cag_0763
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cag_0763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TPR_9
Motif
Other DBs
NCBI-ProteinID:
ABB28031
UniProt:
Q3ASJ4
LinkDB
All DBs
Position
1074992..1078375
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AA seq
1127 aa
AA seq
DB search
MSAFLSIKSIHDKNSSLTFFLISNQFQSGTMALHLYTSNRMEMLVDSLAEVVRQPLASVF
EHEVIVVQSRGMQRWLSMELAGRFGVWANGRYPFPNAMVQELFKQLLPSVAQSDAFKKEV
MSWRVMRLLPHLLEMAEFLPLRRYAADDSDGLKLFQLSEKIADTFDQYTLFRPDMLALWE
AGGGVAEGGEAWQPLLWRALVEGAGLHRGQLRELLFRQLSRSSSKISELPERITLFGISY
LPQFHLELFAAVARLTEVHLFLLSPTQEYWGDIVSRKAMARLSEAEQALRSEGNPLLASL
GRIGRDFSEMVLEMSDEALDSQEFYDDPPEDSLLHALQWDILHLQGAGEMDETPRLLQPH
DRSVQIHACHTPLREVEVLYDAILGLLEAHPHISLRDIIVMTPDIESYSPYIATVFGTAR
EAGKEGKGVVALPFSIADRRMMHEGEIASALLKLLALHGSRLTASMLFDFLASPPVSRAF
GFDAEALRLIRGWIEGSGIRWGMDEEDRRERNLPAYRDHSWRAGLERLLLGYAMPEEEQL
FQGVLPYGDIAGSAAEMLGRFAEAVEALERFVSSSEPSRTLEAWRQQYAMWLTTFFAPDE
DSEREFATLATLGEELAEYGINAGFEENISPLVFFTWLRSRLEEQEQGLGFMTGGITFCA
MLPMRSIPFRVVMLIGMNDGAFPRQSRAPSFDLITRQPQKGDRSLRNEDRYLFLESILSA
RELLYISYVGQSIRDNSEIPPSVLVSELLDAVRRAFVLPNESSIEQHLVVRHRLQPFHHD
YFSEHSPLASYSSENYYALIASEQSLQAVPPIRSFISTALSEPTAEWRTVQLEQLLHFYD
NPSAFFLEQRLGIKPEGLLLPLQDSEPFAVESLERYRLQQELLEAQLRGQPAEALLPLFK
SRGMLPPAQHGELLFATVMQEVDDFAATLRQHLAGEVALAPLEVDIEVGEFRIVGRLDGI
WANAMLRYRPARMKVRDRFRWWIEHLLLCALQPTGYPLTTHMLMSDGEWSYPPIDNPHQH
LTTLLQRYWQGLCEPLPFFPRSAYAFVLKGMDANHHLDVGKGIDAAYREWRDDTFTNRKG
EGSDSAIQRCFGAAANPFSDTFIELALELFTPMMEAMGAMGDGKRSG
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccttcctatctataaaatcaatccatgataaaaattcttcccttaccttcttt
ttgatatcaaatcaattccaatctggcactatggcactgcatctttatacaagtaaccgc
atggaaatgttggtggatagccttgcggaggtggtgcgccaaccgttggcttcggtgttt
gagcatgaagtgattgtggtgcagagccgtggtatgcagcgttggctttcaatggagttg
gcgggacgttttggcgtgtgggcaaatgggcgttatccttttcctaacgctatggtgcag
gagctttttaagcaattgttaccatcagttgcgcaaagtgatgcttttaaaaaagaggtg
atgagttggcgtgttatgcggcttttgcctcacttactggagatggcggaatttttgccg
cttcgtcgttatgctgccgatgatagcgatggcttgaaattgttccagctttcagaaaaa
attgctgatacttttgatcaatacaccttatttcgccccgatatgcttgctctgtgggaa
gcgggtggtggtgtggcggaggggggcgaggcgtggcagccgttgctgtggcgggcgttg
gtggagggggctgggctgcatcgtgggcagttgcgagagctattgtttcgtcagttgtcg
cgctcttcatctaaaatatctgaattgcctgagcgcatcacgctttttggtatttcctac
cttcctcaattccatcttgagctttttgcggcagttgcccgtttaacggaggtgcatctt
tttttattaagtccaacgcaagagtattggggcgatattgtgtcgcgcaaggcgatggcg
cgtttgtcggaagctgagcaggcgttgcggagcgaggggaatccgcttttggcatcgttg
gggcgcattgggcgcgatttttcggagatggtgttggagatgagtgatgaggcgcttgat
tcgcaagagttttatgatgatccgcccgaggattcgctgcttcatgcgctgcaatgggat
attttgcatttgcaaggagcgggcgaaatggatgaaacgcctcgtttgctccagccgcac
gatcgttcggtgcaaattcatgcttgccatacccctttgcgcgaagtggaggtgctttac
gatgccattcttggtttacttgaagcgcatccccacatttcgttgcgcgatattattgta
atgacgcccgacatcgaaagttattctccctacattgctaccgtttttggtacggcacgc
gaggcggggaaggaaggtaagggggtggtggcgctgcccttttctattgctgataggcgc
atgatgcacgagggtgaaattgcctcagcgctgctcaagttgttggcgctgcatggtagc
cgtttaaccgcctcaatgctgttcgattttttagcttctccccctgtaagccgtgccttt
ggctttgatgccgaagcgctcaggcttattcgtggttggattgaggggagcggcattcgt
tggggaatggatgaggaggatcggcgcgagcggaacttgccagcctaccgcgaccattcg
tggagagcggggcttgagcgcttgctgttgggttacgctatgcccgaggaggagcagctt
tttcagggcgtgctgccttatggcgatattgcgggatcggcggcggaaatgcttgggcgc
tttgctgaggcggtggaggcacttgagcgttttgtgagttcaagtgagccttcgcgcacg
cttgaggcgtggcggcagcagtacgcgatgtggcttaccaccttttttgcgcccgatgag
gattccgagcgtgaatttgcaacgcttgcaactcttggcgaggagcttgcggagtatggc
ataaatgctggatttgaagaaaacatatcgccccttgttttttttacatggctgcgtagt
cgccttgaagagcaagaacaagggcttggctttatgacgggcggcattactttttgtgcc
atgcttcctatgcgaagtattcccttccgtgtggtgatgctgattggcatgaatgatgga
gcttttccgcgccaaagccgcgccccaagcttcgaccttattacccgtcagcctcaaaaa
ggagatcgctcactgcgcaacgaagatcgctacctctttcttgaatccatcctttccgcc
cgagaactgctttacataagctacgttgggcaaagcattcgcgacaatagcgaaattccg
ccatcggtgcttgttagcgaactgcttgatgccgttcggcgggcttttgtgctgccgaat
gaatcatccattgaacaacatttggtggtgcgccatcgcttgcaaccctttcaccacgac
tattttagcgaacattcgccgcttgcaagctattcaagcgaaaattactatgcgctgatt
gcttcggagcaatccttacaagcagttcctccaatccgttcttttatcagcaccgcctta
tccgaacccacagccgaatggcgcaccgtgcagcttgagcaattgttgcacttttacgat
aatccatctgccttttttcttgaacaacgacttggcattaaacccgaaggtttgctgttg
ccgcttcaggatagcgaaccctttgcggtagagagtttggagcgctaccgcttgcagcaa
gagttgcttgaagcacaattgcgagggcaaccagccgaagcgctcttgccgctttttaaa
agtcgaggcatgttgccacccgcccagcatggcgaattgctttttgctacagtgatgcag
gaggttgatgattttgcagccactcttcggcagcatcttgcgggagaagtagcgcttgca
ccgcttgaggttgatattgaggtgggagaatttcgcatagttggacgtttagatggtata
tgggcgaacgccatgctgcgctaccgtccagcacgcatgaaagtacgcgaccgctttcgc
tggtggattgagcatttgttgctgtgtgcccttcagccaacgggctatccccttaccacg
catatgcttatgagcgatggcgagtggagctacccgcctattgacaatccgcatcaacat
ctcacaacgcttcttcaacgatattggcagggattgtgcgagccgctgccatttttcccc
cgatcagcgtatgcttttgtattgaaagggatggatgccaatcaccatcttgatgttggc
aaaggcattgatgccgcttaccgcgaatggcgcgatgacacctttacaaatcgtaagggt
gaaggctccgattccgccattcaacgctgttttggagctgctgccaatccttttagcgat
acgtttattgagcttgcgctggaactgtttacgccgatgatggaggctatgggggctatg
ggggatgggaagaggtcggggtaa
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