Chlorobium chlorochromatii: Cag_0770
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Entry
Cag_0770 CDS
T00290
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cag_0770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_0770
Enzymes [BR:
cch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cag_0770
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cag_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
RecD_N
AAA_11
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
AAA_22
SH3_13
nSTAND3
PhoH
UvrD_C
AAA_16
ResIII
DEAD
Flavi_DEAD
Mg_chelatase
T2SSE
NTPase_1
AAA_28
AAA_5
AAA
NPHP3_N
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
ABB28036
UniProt:
Q3ASI9
LinkDB
All DBs
Position
1087346..1089085
Genome browser
AA seq
579 aa
AA seq
DB search
MITYNERPIDRHFAKMLLQHCGNSKHELLPLLFSMVSNAIGQGSVCLNLADIAAQSVTYG
NRTVQLPPLAELMRLFSTLPVVSRNGAEFRPLVIDNVGRLYLYRYWRYEHDLAEALRQKA
STKSCTIEKKSEAVQVLLQQLFPEGSDAQQKQAAEVALHRRFCIISGGPGTGKTTTVVRI
VALLLEQAGGERLRIALAAPTGKAAARLKQSISTIRGTLSCSQTLQQAIPSEVVTIQRLL
GAIPNSTRFRYHQRNPLPYDVLIVDEASMVSLSLMHALLMALKPECRLILLGDRHQLASV
EEGAMLGDLCSAVGEATPHSPLAGTLVMLEKSYRFQTGGAIAELSRAMNQGEGEQALALL
QSNQSAALRWQPLPTPDALPSALGRAAVAGYRAYCEATTPAEAMERFERFRILAALREGI
YGVSGLNRFVEQALAREGLLAPTSLWYAYRPVLITVNDYNVRLFNGDTGLLLPDAENGGV
SAWFTTPDGGLRRLPPERLPAHETAFCMTIHKSQGSEFDNVLLILPPTDTPLLSRELLYT
GVTRAKSRVEVWGDPTFVQAACKRTTIRHSGFREALALE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgataacctataacgagcgcccaatagatcgccattttgctaaaatgttgcttcagcac
tgtggcaattcaaagcatgagctgttgccgttgcttttttcaatggtaagtaacgccatt
gggcaggggagtgtttgcttaaatcttgccgatattgccgctcaatccgttacgtatggt
aaccgtaccgtgcagcttccaccacttgcggagctgatgaggctcttctccaccttgcca
gtagttagccgtaacggtgcggaatttcgtcccttagtgattgataacgttggtcgcctc
tacctttaccgttattggcgctacgagcacgatcttgctgaagcgttgcgccaaaaagca
tccaccaaatcatgtacgatagaaaaaaagagcgaagcggtgcaagtgctgttacaacag
ctttttcctgaaggttctgacgcacagcaaaagcaagcggctgaagtggcattgcatcgc
cgtttttgcattatatcaggcggaccaggtacgggcaaaacgacaacggtggtgcgcatt
gtggcgctcttgttggagcaagcgggtggagagcggttgcgcattgcccttgccgctcca
acgggcaaagccgctgcacgcctcaagcaatccatcagcaccattcgtggcactctttca
tgctctcaaacattacaacaagccattccgagcgaagtggttactattcagcgcttgctt
ggagccattcctaattccacccgctttcgctaccatcaacgcaatccactcccttacgat
gtgctgattgtggatgaagcctccatggtgtcgctctcattgatgcacgcgctgctgatg
gcgctcaaacccgaatgccgcttaattctccttggcgatcgccaccaacttgcctctgtg
gaagagggtgccatgttgggcgatctctgtagtgcggtaggggaggcaacgccccactcg
ccgcttgcaggcacgttggtgatgttggaaaaaagctatcgctttcaaacgggtggcgca
attgctgagctaagccgcgcaatgaatcagggagaaggcgaacaagcgcttgccctgctc
caaagcaaccaatcagccgcattgcgttggcagccgttgcccacgcccgatgctctgcca
agcgcacttggacgtgcagcggtggcgggctatcgtgcttattgcgaagccacaacacct
gcggaggcaatggagcgctttgagcgttttcgcattcttgcggctttgcgagagggcatt
tatggcgtaagcggcttaaatcgctttgtcgaacaagcccttgcccgcgaaggattgctt
gcgccaacatcactatggtacgcctatcgccccgtgctcattaccgtcaacgactacaac
gtgcggctttttaatggcgatacgggattgctcttgcccgatgccgaaaatggtggcgta
agcgcatggtttaccacgcccgatggaggcttacgtcgcttgccacccgaacgcctgcct
gcgcacgaaacagctttttgcatgaccatccataaaagccaaggttccgaatttgataat
gtcttattgattttaccgccaaccgatacccctctgctttctcgcgagctgctctacaca
ggggttacacgagcaaaaagtagggttgaagtgtggggcgacccaacatttgtgcaagct
gcctgcaagcgcaccaccattcgccattcaggctttcgtgaagccttagcgctggaataa
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