Chlorobium chlorochromatii: Cag_0847
Help
Entry
Cag_0847 CDS
T00290
Name
(GenBank) Helicase RecD/TraA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cag_0847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_0847
Enzymes [BR:
cch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cag_0847
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cag_0847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
nSTAND3
Helicase_RecD
PIF1
RsgA_GTPase
AAA_22
NTPase_1
DEAD
AAA_29
NACHT
NPHP3_N
MeaB
AAA_28
AAA_16
AAA
HHH_2
ABC_tran
AAA_5
TrwB_AAD_bind
AAA_23
ATPase_2
cobW
PhoH
SLFN-g3_helicase
AAA_24
ATP_bind_1
T2SSE
MobB
CbiA
UvrD-helicase
TsaE
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ABB28112
UniProt:
Q3ASB3
LinkDB
All DBs
Position
complement(1177760..1179976)
Genome browser
AA seq
738 aa
AA seq
DB search
MSVQDGQESYYYSPKERLSGAVERVTFHSQKNGFSVLRIKVKGRRDLVTVVGATPSIAPG
EFVECLGEWHNDSTYGLQFRATELTVVPPETIDGIEKYLASGMVKGIGPHFAKTLVYAFR
EDVFTVIEEEPERLLELPGIGQKRMEMVTSAWADQKVIRDIMVFLQSHGLGTSRAVRIFK
TYGNESILRVKENPYRLVLDIYGVGFKTADALAMQLGIAPDSLIRAQAGVHHVLQEIASS
GHCAAPREQLVAEASRLLSIPEERTHEAIDAELRAGNLVREELRGVETLYLLSLHRAELG
VATSLMRLLEGEIPWRHLAIEEALPWVEAQNNITLSPSQKEALHTALTNKVTVITGGPGV
GKTTLVKSILLILQAQKVRVALCAPTGRAAKRLSESTGLEAKTIHRLLEFDPLTGGFKHQ
RDNPLECDLVVVDESSMVDVVLMNRLLAAVPEKAALLLIGDVDQLPSVGAGAVLADIIRS
ETIPTIRLTEIFRQAASSRIIMNAHRINKGELPLRDESNTLSDFYLIAANTPEEIYNRLL
TVITERIPARFGLHPVRDVQVLTPMNRGGLGARALNVELQKVLNGQVEPSVTRFGTRYAA
GDKVIQMVNNYDKEVFNGDIGHISAVEREDGAVLVDFDGTLVSYEFGELDELSLAYATSI
HKSQGSEYPAVVIPLAMQHYNLLERNLIYTAVTRGKKLVVIIGETRALAMAVKNHKAMRR
LTGLAERLSALARYEANL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcaggatgggcaagaatcctactattattcccccaaagagcgactaagtggc
gcggttgaaagggtaacctttcatagccaaaaaaatggcttttcagttctccgcattaaa
gtaaaagggcgtcgtgatttagtaaccgttgttggtgcgacgccctccattgcgccgggt
gaatttgtggagtgccttggagagtggcacaacgattctacctatggtttgcaattccgc
gcaactgagcttaccgttgttccccccgaaaccattgatggcattgaaaaataccttgct
tcgggcatggtaaaaggtattggtccgcactttgcaaaaaccttagtgtatgcctttcgc
gaagatgtatttaccgttatagaagaggagcctgagcgcttgcttgagttgcccggcatt
gggcaaaagcgcatggaaatggtaacaagcgcatgggctgaccaaaaggtaattcgcgat
atcatggtctttttgcaatcacacggtttaggcacaagccgtgcggtgcgcatttttaaa
acctacggtaacgagtcaattttgcgggttaaggagaatccttaccgcttagtgcttgat
atttatggcgtgggttttaaaacggctgatgctcttgctatgcagcttggcattgccccc
gattcgctgattcgtgcgcaagcgggcgtacaccatgtgttgcaggaaattgcctcatcg
gggcattgtgcggcacctcgtgaacagcttgtggctgaagcgtctcgcttacttagcatc
cccgaagagcgtactcacgaggcaattgatgctgaattgcgagcaggcaacttagtgcgc
gaagagctgcgaggcgtggaaacactctacttgctttcgctccaccgtgccgaacttggt
gtagcaacctccttaatgcgcttgcttgagggcgaaattccctggaggcacttagccatt
gaggaggcgctgccgtgggttgaagcacaaaacaatatcaccctttcaccctcccaaaaa
gaggcgctccatacagcacttaccaacaaagtaactgttattacgggcggaccaggtgtg
ggtaaaaccaccttagtaaaaagcattctgctcattttgcaagcccaaaaagtgcgtgtg
gcactttgcgctcctacaggacgtgcagcaaaacgcctctcagaatccacaggacttgaa
gcaaaaaccatccaccgcttgctggaatttgatcccctaacgggtggctttaaacatcaa
cgcgataatcccttagagtgcgatttagtagtggttgacgaaagctcgatggttgacgta
gtgcttatgaaccgcttgcttgccgctgtgcccgaaaaagccgctcttctgctgattggc
gatgttgaccagctaccatcggtaggagcaggcgccgtgcttgccgatattatccgctcc
gaaaccattcccaccattcgcttaaccgaaatttttcgccaagccgcttcgtcgcgcatt
attatgaatgcccaccgcattaataagggtgaactgccattacgcgatgaaagcaacacg
ttaagcgacttttacctcattgcagcaaacactcccgaagaaatttataatcgcttgctt
accgttattaccgagcgcattcctgcccgctttgggcttcaccccgtgcgcgacgtgcaa
gtgcttacccccatgaatcgtggaggacttggcgcacgagcgcttaatgtggagctgcaa
aaagtgctaaatgggcaggtagaaccctccgtaacgcgctttggcactcgctacgccgca
ggcgataaggtgattcaaatggtcaacaattacgataaagaggtctttaatggcgatatt
gggcacattagcgccgttgagcgcgaagatggcgcggtgttagttgactttgatggaaca
ctcgtaagctatgaatttggggaacttgatgagctatcgcttgcctatgcaaccagcatt
cacaaaagccaaggctccgaatatcccgcagtggtaattccccttgccatgcaacattac
aaccttttagaacgcaaccttatttacaccgccgttacacgaggcaaaaagttagtggta
attattggcgaaacccgcgcgcttgccatggcagttaaaaaccacaaagctatgcgccgc
cttacaggattagcagaacgcctttccgcccttgctcgttacgaagcaaacttgtag
DBGET
integrated database retrieval system
