Chlorobium chlorochromatii: Cag_0876
Help
Entry
Cag_0876 CDS
T00290
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cch
Chlorobium chlorochromatii
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_0876
Enzymes [BR:
cch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Cag_0876
DNA repair and recombination proteins [BR:
cch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Cag_0876
Prokaryotic type
Cag_0876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ABB28141
UniProt:
Q3AS84
LinkDB
All DBs
Position
1208588..1209967
Genome browser
AA seq
459 aa
AA seq
DB search
MLHSPVDPRRVRLLNHHIDGNGVVIYWMSRDQRVRHNWALLFARWKAAMLQQPLMVVFTL
APSFLGAPLRHYDVLFNGLQEVETELRALNIPFMVLQGEPSEELPRYAMHHNASMVVADY
SPLHLTRCWKNQVAEALSVPLYEVDAHNIVPCRVASPKQEYAARTIRPKINKLLGEFLTP
FPELEALPQPLTEPPVNWQKLRSHFHADASVAPVGWLTAGEAGAHATLQCFVQQKLNGYA
TQRNDPSLEATSRLSPYLHFGQISTQFVALQVKAAHAPQEDKDAFLEELIVRRELSDNYC
HYNASYDRLSGIPAWAQETLARHATDPRDYIYSHEAFEQAKTHDPLWNAAQHELLQSGII
HGYMRMYWAKKILEWSRTPEEAFEIALWLNDRYALDGREPNGYVGVAWSIGGVHDRPWRE
RPVYGTIRYMNANGCARKFDVKRYIHNVTSRRPQQVGLF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgctccactcccccgttgatccgcgccgcgtgcggttgcttaatcaccacattgatggc
aatggcgtggtgatttattggatgtcgcgcgatcagcgggtacgccacaattgggcgctg
ctctttgcccgttggaaagctgccatgttgcagcaaccgctgatggtggtttttacgtta
gctccctcgtttcttggcgctccgcttcgccactacgatgttctgtttaacggacttcag
gaggtggaaacggagttgcgggcgctcaatattccgttcatggtgctgcaaggcgagcca
agcgaagagctgccgcgctacgctatgcaccacaatgccagcatggtggttgccgactat
tcgccgctccacctcactcgttgctggaaaaaccaagtggcggaagcgctcagtgtgccg
ctgtacgaagtggatgcccacaacattgtgccttgcagggttgcttctcctaagcaagag
tatgccgcccgcaccattcgcccaaaaatcaataagcttttaggggaatttctcaccccg
tttcctgagcttgaagcgctgccgcaaccgcttacagagccgcccgtgaattggcagaaa
ttgcgcagccactttcacgctgatgcaagtgttgcacctgttggatggctaacggcgggc
gaagcaggcgctcacgccacgctacaatgctttgtgcagcaaaagttgaacggttacgcc
acgcagcgcaacgacccctcgcttgaagccacctcacgcctttcgccataccttcacttt
gggcaaatcagcacgcaatttgttgccttgcaagtaaaagcggctcatgctccgcaagag
gataaagatgcctttcttgaggaattgattgtgcgccgcgaactatcggataactactgc
cattacaatgcctcttacgaccgcttgagcggaatccccgcatgggcgcaagaaaccctt
gcccgccacgccactgacccacgcgactacatttatagccacgaagcttttgagcaagca
aaaacgcacgatcccctttggaacgccgcccagcacgaattgctccaaagcggcattatc
cacggctacatgcgcatgtattgggcaaaaaagattttggaatggagccgcacgcccgaa
gaagcctttgaaattgcgctgtggcttaacgaccgctacgcccttgatggacgggagccg
aacggctacgttggtgtagcatggtcaattggcggcgttcacgatcgcccatggagagag
cgccccgtctatggaaccatccgctacatgaacgccaacgggtgtgctcgcaagtttgac
gtgaaacgctacattcacaacgttacgagccgccgcccgcagcaagtggggttgttttag
DBGET
integrated database retrieval system
