Chlorobium chlorochromatii: Cag_1017
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Entry
Cag_1017 CDS
T00290
Name
(GenBank) HhH-GPD
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cag_1017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_1017
Enzymes [BR:
cch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Cag_1017
DNA repair and recombination proteins [BR:
cch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cag_1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Ogg-HhH
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
ABB28279
UniProt:
Q3ARU6
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All DBs
Position
1361039..1361977
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AA seq
312 aa
AA seq
DB search
MLKEFLITHNKELEIEKSLFSGQSFLWKKHQSNLDSFVTVMDKRLVIISQLSPYTIRVHC
DSEVLYGQKISAFISHYFTLDVPFQKIFSSSFKSNYSEVWRLLDGYKSIALLRQHPFETL
ISFMCAQGIGMRLIRQQINRLCERYGEFYEAEMEGEMLCFSGFPAPEQLACLNAEELSYC
TNNNRERAANIIAVARKVVEGRLDLSSLSYPNMAFEEVQARLTQERGIGLKIADCVALFG
LGYFEAFPIDTHVHQFMAQWFKVPAASRSLTPATYRQLTLEAREILGSHYTGYAAHLLFH
CWRCEVKKLCWF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagaatttttaataacacataataaagagttagaaatcgaaaaatctctcttt
agtggtcaatcttttctctggaaaaagcatcagagtaatcttgattcttttgttactgta
atggataagagattggttattataagccaactatctccttataccataagggttcattgc
gatagtgaggtgctttatgggcaaaaaatttcagcttttataagccactactttacgctt
gatgtcccctttcaaaagattttttcatcctcatttaaaagtaactactcggaggtatgg
cgcttattagatgggtataaatccatcgcactgttacggcagcatccgtttgaaaccctt
atctcatttatgtgtgctcaagggattggtatgcgattaattcgccagcaaatcaatcgt
ttatgtgaacggtatggagagttttatgaggcagaaatggagggtgaaatgttgtgcttt
tcgggctttcctgcgcccgagcaacttgcttgcttgaacgctgaggagctgagttactgt
accaataacaatcgtgaaagagcggcaaacattattgcggttgcgcgtaaggttgtggaa
ggtagattagatttgtcgagtttgtcatatccaaacatggcgtttgaggaggtgcaagct
cgcttgacgcaagagcgtggcattgggttaaaaattgccgattgcgttgctttgtttggt
ttgggatattttgaggcattccctattgatacgcatgtgcatcaatttatggctcagtgg
tttaaagtgcctgctgcctcgcgttcactaacccccgccacctatcggcagttaaccctc
gaagcgcgtgaaattcttggcagccattatacgggctatgcagcgcacctgctttttcat
tgttggcgttgtgaggttaaaaagctttgctggttttaa
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