Chlorobium chlorochromatii: Cag_1228
Help
Entry
Cag_1228 CDS
T00290
Name
(GenBank) DNA-binding protein Fis / transcriptional regulator, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
cch
Chlorobium chlorochromatii
Pathway
cch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cag_1228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cch03000
]
Cag_1228
Transcription factors [BR:
cch03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cag_1228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
AAA_2
AAA
HTH_50
bpMoxR
Mg_chelatase
AAA_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABB28489
UniProt:
Q3AR86
LinkDB
All DBs
Position
complement(1629314..1630963)
Genome browser
AA seq
549 aa
AA seq
DB search
MLITQQNDYGSISLLAEVSRTITHEEDINKVLRLVLFIMSENMHMQRGMITILNRSTGEI
VINESFGLTEEERERGRYHIGEGVIGHVVKTGKAVIVPSIQDEPLFLDRTGSRAQAKKEE
LCFICIPIKAGSEIIGTLSADRHVEPVTADEHRRKTRQTDDRDERIDKLQFYVDQLSIIA
AMISQAVRLKQLAYEAGSKNVQDLSNLPPFAASIPPRSEDRQVNAIPPPSPDRPANIIGN
TKPMVSLYSMIDKIAKTSATTLVLGESGVGKELVASAIHFKSRRAEKPFIKFNCAALPEN
IVESELFGHEKGAFTGALATRHGRFEMANNGTIFLDEVGELSLSVQAKLLRILQEKEFER
VGGSKTIKVDVRVIAATNRNLEELIRQGQFREDLFYRLNIFPITVPPLRERKTDILLLAD
YFVEKYNKANQKGVRRISTTAIDMLMRYHWPGNVRELQNCIERAVILSEDNVIHGYHLPP
TLQTAESSGTPYTGSLQQKLDAIEKEMIIEALKRTQGNMSRAAMQLGLSERIMGLRIKKF
NIDYRKFRV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcttattacacaacaaaacgactacggcagcatcagtcttttagctgaagtaagccgc
accattacgcatgaagaggacattaacaaagtgttacgcttagtgctctttattatgtcg
gaaaacatgcacatgcagcgaggtatgattaccattcttaaccgcagcacgggcgaaatt
gttattaacgaatcgtttgggctaaccgaagaggagcgtgagcgtggacgctatcacatt
ggcgagggtgttattgggcatgttgtaaaaaccggcaaagccgttattgtgccctccatt
caagatgaaccgctttttcttgatagaacaggatcgcgtgctcaagcaaaaaaagaggaa
ctctgctttatttgcattccgattaaagcaggctccgaaattattggtaccctcagtgcc
gaccgccacgtagaacccgttactgccgatgagcatcgccgcaaaacacgccaaaccgac
gaccgtgatgagcggattgataaactccaattttatgtggatcagctctccattattgcc
gccatgatttcgcaagccgtgcgcttaaagcagcttgcctacgaagcaggcagcaaaaac
gtgcaagatttgagcaacttgccaccttttgcagcctccattccaccccgcagcgaagat
cgccaagttaacgccattccgccgccatcgcccgatcgcccagcaaacattattggcaac
accaagccaatggtttcgctttattccatgattgataaaattgccaaaaccagtgccacc
acgcttgtgcttggcgaaagcggcgttggtaaagagttagtagcaagcgccatccacttt
aaaagccgccgcgctgaaaagccctttattaaatttaactgtgcagcccttcccgaaaac
attgtagagagcgaactttttgggcacgaaaaaggagcttttacaggtgcccttgctaca
cggcatggacgctttgaaatggcaaacaacggcactatttttcttgatgaagtgggcgaa
ctcagcttatcagttcaagcgaaattgttgagaattttgcaagaaaaggagtttgagcgc
gttggcggctcaaaaaccattaaggtagatgttcgtgttattgctgccaccaaccgtaac
ctcgaagagcttattcggcaggggcagtttcgcgaagatttattctatcgcctcaacatt
ttccccattaccgtaccacccttgcgcgagcgtaaaaccgatattttgctgcttgctgac
tattttgttgagaagtataacaaagccaatcagaaaggagtacgccgaatttccaccaca
gccattgatatgcttatgcgctaccattggcctggtaacgtgcgcgaattgcaaaactgt
attgagcgtgcggttattttaagtgaggataatgtgattcacggctaccacttgccgcca
accttgcaaacggcggaatcaagcggtacgccttacacgggctcattgcaacaaaagctt
gatgctattgaaaaggaaatgattattgaagcgcttaaacgcacgcaaggcaatatgtcg
cgtgctgccatgcagcttggattatcggagcgtattatgggattgcgcattaaaaagttt
aatattgattataggaagtttagggtgtga
DBGET
integrated database retrieval system
