Chlorobium chlorochromatii: Cag_1301
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Entry
Cag_1301 CDS
T00290
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cag_1301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_1301
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cag_1301
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cag_1301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
nSTAND1
nSTAND3
UvrA_inter
Viral_helicase1
ATPase
AAA_23
DnaJ_CXXCXGXG
cobW
IIGP
Motif
Other DBs
NCBI-ProteinID:
ABB28561
UniProt:
Q3AR14
LinkDB
All DBs
Position
1766885..1769713
Genome browser
AA seq
942 aa
AA seq
DB search
MNAHGQLTDTSLPDIVLKGINTHNLRNISVRIPRNKFIVITGVSGSGKSSLAFDTLYAEG
HRRYVESLSAYVRQFLERMPRPDIEHVEGIAPAIAIEQKALPKNPRSTVGTVSEIYDYLR
LLYARIGKIYSRDTNELVLKHTPDDVSLQAGFIEDGKKFYVGFFFPHHHTAQQLDCSPEE
EIANLLKKGFFRLLAGDELLDLNQEADYQKVLDMPAKVRAELLVVVDRFVARNNDKLFSR
ISQAAESSFMESGGHAVLKVVDGKTYRFSDRLELHDIEYQEPSPQLFAFNSPIGACTTCQ
GFGRIMGIDEDAVIPDKSLSIEEGAIACWNSEKYRWNLLELMHYAPKFGVPLREPYEKLT
FEQKEIIWKGTPDGSFNGIRAFFAEIEKDAGYKMHYRVFLSRYRGYAICPDCEGSRLNPD
ALQVKISGRHIGEVTRMSIGEVAEFFRNLNISPFDRSVAEVILQEINRRLGYLLDVGLDY
LTLDRLTHTLSGGEFQRINLSTSLGSPLVGTMYILDEPSIGLHQSDSARLIALLRKLRDL
GNTVVVVEHDREIIEAADEVIDLGPFAGRLGGEVVFQGSMEAMRSSGTSLTAQYMNGEQQ
IEVPQQRRTVDFSACITISGAMQNNLKNIDVQIPLKVMTCITGVSGSGKSTLINDILCKG
ILREKHGSRGTVGTHRSLTGAWLIDRIEHVDQSPIGKSSRSNPVTYMKIFDDIRTLFANT
PDARKKKVKAGYFSFNIPGGRCEVCSGEGSVHIEMQFLADIEAVCEACNGLRYQPEALAI
KFNGKSIAEVLDMTVSEALSFFKGEKNIVKKLSVLDQVGLGYIRLGQSSSTFSGGEAQRL
KLATFIAHADTTHTLFVFDEPTTGLHFEDIKKLILCFEKLLEQNNSLIIIEHNLDIIKQA
DWVIDLGPGAGDKGGHLVEQGTPEEVAQCTESLTGQYLRGVV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcacgggcaactgaccgacacctccttaccggatattgtgctgaaaggcatt
aacacccacaacctccgcaacatttccgttcgcattcctcgcaataaatttattgttata
acgggcgttagtggctcaggcaaatcaagccttgctttcgacaccctttacgccgaaggg
catcgccgttatgtggaatcgctctcggcgtatgttcgccaatttcttgagcgaatgcct
cgccccgatattgagcacgttgaaggcattgcgcctgccattgctattgagcaaaaagca
ctccctaaaaatccccgctcaaccgttggcaccgtgtcggaaatttatgactacctccgc
ttgctctatgcccgcattggtaaaatttactcgcgcgacaccaacgagttagtgctcaag
cacacacccgatgacgtcagcttgcaagcaggttttattgaggatggcaaaaaattttat
gtgggatttttttttcctcaccatcataccgctcaacagctcgactgctcgcccgaagag
gaaattgcaaatctcctgaaaaaaggctttttccgcttgcttgcaggcgatgagctgctt
gacctaaaccaagaagctgactaccaaaaagtgctcgacatgcccgctaaggttcgcgct
gaactcttagtggtggttgaccgctttgttgcccgcaataacgacaaactctttagccgc
atttcgcaagctgccgaaagcagttttatggaatcgggcggacacgcagtgctaaaagta
gttgacggcaaaacctaccgctttagcgatcgccttgagctgcacgatattgagtatcaa
gagccttcgccccaactctttgcctttaactcccccattggcgcttgcaccacctgccaa
ggttttgggagaattatgggaattgatgaagatgccgttattcccgataaatcactttcc
attgaagagggagcaattgcttgctggaattctgaaaaatatcgctggaatttattggag
ctgatgcactatgcgccgaagtttggtgttccactacgagagccttacgaaaagctcacc
tttgaacaaaaagagattatttggaaaggaactcctgacggaagctttaatggcattcgc
gctttttttgcggaaatagaaaaagatgccggttacaaaatgcactaccgcgttttttta
agccgctaccgaggctacgccatctgccccgattgcgaaggaagccgcttaaaccccgat
gctcttcaggtaaaaatttcaggacgccacattggcgaagtaactcgcatgagcattggc
gaagtggctgaatttttccgcaacctcaacatctccccctttgaccgctcggtagctgaa
gtgattttgcaagaaattaatcgccgacttggctacttgctcgacgtaggacttgattac
ctcacgcttgaccgcttaacccacaccctaagcggcggcgaattccaacgcatcaacctc
tccacctcgcttggctcaccgcttgtaggcaccatgtacattcttgacgaaccaagcatt
gggctacaccaaagcgactccgcacgcttgattgcgctgctccgcaaattacgcgacctt
ggcaacaccgttgtggtagttgagcacgaccgcgaaattattgaagccgccgatgaggtg
attgatcttggaccatttgctggacggcttggtggcgaagtagtatttcaaggcagcatg
gaagccatgcgctcatcgggcacctcgctcactgcacaatacatgaatggcgaacaacaa
attgaggtaccccaacagcgccgcacggttgatttctccgcctgcattaccatcagcggt
gccatgcaaaacaacctcaaaaacattgatgttcaaattccgcttaaagtaatgacctgc
ataaccggcgttagtggttcaggcaaatcaaccctcattaacgatattctttgcaaaggc
attctccgcgaaaaacatggaagccgtggcaccgtaggcacccaccgctcgctaacaggc
gcatggctcattgaccgcattgagcacgttgatcaatcgcccattggcaagtcaagccgt
agcaatccggttacctacatgaaaattttcgacgacatccgcaccctttttgccaacacg
cccgatgctcgcaagaaaaaagtaaaagcaggctacttctcttttaacattcccggcggt
aggtgcgaagtgtgctcgggcgaaggcagcgtgcatattgaaatgcaatttcttgccgac
attgaagccgtatgcgaagcctgcaacggacttcgctaccaacccgaagcgcttgccatt
aagttcaacggtaaatccattgccgaagtgctcgacatgacggtaagcgaagcactgagc
ttttttaaaggcgaaaaaaacattgtaaaaaaactcagcgttctcgatcaagtaggactt
ggctacatacgtcttgggcaatcctccagcaccttctcaggcggcgaagcacaacgcttg
aagcttgccacctttattgcccacgccgacaccactcacacgcttttcgtgtttgatgaa
ccaaccacaggactacattttgaggatattaaaaagctcatcctttgctttgaaaagctc
cttgagcaaaacaacagccttattattattgagcacaatctcgatattattaagcaagct
gattgggtaattgatttaggaccaggcgcaggcgataaaggtgggcacttggtagaacaa
ggcacacccgaagaggttgctcaatgcactgaatcactgacggggcaatatttgcgaggg
gtggtataa
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