Chlorobium chlorochromatii: Cag_1415
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Entry
Cag_1415 CDS
T00290
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03420
Nucleotide excision repair
cch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cag_1415
03430 Mismatch repair
Cag_1415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_1415
Enzymes [BR:
cch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cag_1415
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cag_1415
MMR (mismatch excision repair)
Other MMR factors
Cag_1415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
HalX
AAA_11
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABB28673
UniProt:
Q3AQQ2
LinkDB
All DBs
Position
complement(1884000..1886231)
Genome browser
AA seq
743 aa
AA seq
DB search
MSNFLHDLNEVQRSAVEATSGPVMVLAGAGSGKTRVITYRIAHLINNEGIAPRNILALTF
TNKAAGEMRERVDTLLHHGASRGLWIGTFHSIFARLLRNSIDRIGYDRNFSIFDADDSRS
LIRQSMAELDISADAVPLNTLQSIISRAKNSFVMPAEFQRNANDYNQQKAAQVYSLYCKK
LKENNALDFDDLLIKPLELFNAHPDVLHELQELFRYIMIDEYQDTNRVQYLVAKMLGARH
RNIFVVGDDAQSIYSWRGADISNILNFQDDYHDAQTFKLVENYRSTGNILKAANSVICRN
QRQIKKELVSHRHAGEPLTVMEAFNERNEAEKVADRIRTMRMSGTNDYRSFAIFYRTNAQ
SRVLEDIMRQQRIPYRLFGSVSFYKRKEIKDAVAYLRFIVNERDSESLLRIINFPPRKIG
DVSIAKLRDFAEVRHISLYEAIHRAAEAGFPARLLNALASFTSVIEALREMATRGTVYDV
LNELFTLTSIPLLLQAENTPESLARHENLQELLSMARDFADHNPDGGSLGDFLENISLAS
DYDETQESDNYVSLMTVHASKGLEFPVVFITGLEERLFPLHTYEPEELEEERRLFYVAMT
RAQEKIFLSYAKSRYQYGQLHQSIASTFISEIDASIVQSEGGRLLSDRRAPREATTPQNH
AAAPAMRRPTTSGMAPSSASSPTAESSSPSISNGTLVHHPLFGQGVVLEVQGKGSKQKVR
IAFRNAGEKTLMVQYANLKIQTS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaattttttacacgatttaaatgaggtgcagcgctctgctgttgaagctacctca
ggtccagtaatggtgctggcaggtgcaggttcaggtaaaacaagggttattacctaccgt
attgcccatcttattaataacgaaggcatagcgccgcgcaatattttagcgttaaccttt
accaataaagcggctggtgaaatgcgggagcgtgttgatacgctcttgcaccacggggca
tcgcgtgggttgtggattggcacctttcactccatttttgcccgcttgctccgcaattct
attgaccgaattgggtacgatcgcaacttctctatttttgatgccgacgatagtcgtagc
ttaattcgccaatctatggcagagcttgatatttcggcggatgcggtgccgctcaacacc
ttgcaaagcattattagccgtgcaaaaaatagctttgttatgccggctgagttccagcgc
aacgcaaacgattacaatcagcaaaaagcagcgcaagtttattcgctctactgcaaaaag
ctgaaagagaacaatgcgcttgattttgatgatttactgattaagccgcttgaacttttt
aatgctcatcctgatgtactccatgaattgcaggagctgttccgttacattatgattgat
gagtatcaggataccaaccgtgtgcaatacttggtagctaaaatgcttggagcacgccat
cgcaatatttttgtggtgggcgacgatgctcaatccatttactcatggcgtggtgccgat
atttccaatattttgaattttcaggatgattatcacgatgctcaaacctttaagttggtt
gaaaattataggagcacggggaacatcttaaaagctgcaaatagcgtgatttgccgcaac
caacggcaaattaaaaaggagctggtgtcgcaccgtcatgcgggtgaaccgctcaccgtt
atggaggcgttcaacgagcgcaatgaggctgaaaaggttgccgaccgtattcgcaccatg
cgcatgagtggcaccaacgattatcgtagctttgctattttttaccgcaccaacgcccaa
tcgcgcgtgcttgaggatattatgcgccagcaacgcattccctaccgcctgtttggcagc
gtttcgttttacaagcgcaaagaaattaaagatgcggtagcctacctccgctttatcgta
aatgagcgagatagcgaatcacttttacgtattattaattttccaccccgtaaaattggc
gatgtcagcattgctaagttgcgcgattttgcggaagtgcggcacattagcttgtacgaa
gcaatccaccgagctgctgaagctggctttcccgcacgtttgcttaatgcgcttgcttcc
ttcacctctgtgattgaagcgcttcgcgaaatggcaacacgcggcacggtgtatgatgtt
ttaaatgaactctttacgcttacctccattccgctcctcttgcaagcggaaaatacccct
gagtcgcttgcacgccacgaaaacttgcaagagttgctctctatggcacgcgattttgcc
gaccacaatccagacggtggctcgctgggtgattttcttgaaaatatctcccttgcttcc
gattacgatgaaacgcaggagtcggataattatgtttcattaatgacggtacacgcctcc
aaagggttggagttccccgttgtttttattacagggcttgaagagcgcctgtttccgttg
cacacctacgaacctgaagagcttgaagaggagcgccgcttgttttatgtggcaatgacg
cgcgcacaagagaaaatttttctttcgtatgcaaaaagtcgctaccaatatgggcagttg
caccaatcaattgcctcaacttttattagcgaaattgatgcctccattgtgcaatcggaa
ggtgggcgcttactttccgaccgccgtgcaccacgcgaagctaccactccgcaaaatcat
gccgcagcgccagcaatgcgtcgtcctacaacgtcaggcatggcaccaagcagtgcaagt
agccctacggcagagagcagtagcccgtcaattagcaacggcaccttagtgcatcacccc
ttgtttgggcaaggtgtggtgctggaagtacaaggcaaaggctcaaaacaaaaagtgcgc
attgctttccgcaatgcgggcgaaaaaacattaatggtgcagtatgccaatttgaaaata
caaacatcatga
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