Chlorobium chlorochromatii: Cag_1460
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Entry
Cag_1460 CDS
T00290
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cch
Chlorobium chlorochromatii
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cch03016
]
Cag_1460
Enzymes [BR:
cch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cag_1460
Transfer RNA biogenesis [BR:
cch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cag_1460
Prokaryotic type
Cag_1460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF2062
Motif
Other DBs
NCBI-ProteinID:
ABB28716
UniProt:
Q3AQK9
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All DBs
Position
complement(1925459..1926226)
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AA seq
255 aa
AA seq
DB search
MCNVHAQQGSAQEAPPPGELLLIDKPLDWTSFDVVAKVRNTYRKCGSKRKVGHCGTLDPK
ATGLLIVATGRKTKEISQLEQLDKVYDGVIKLGAITASHDTETPEEQLCDVAHLSEAELH
AVAATFIGNRLQQPPMHSAAWHNGRRLYEHARKGEVIRERKAREIVVHRFTITNVALPFV
SFELHVSKGAYIRVIADEFGAALGVGGYLAALRRTAIGEWQLTNALSVNDTIEQIHNNAS
KGALCGTASTIHPAT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaacgttcacgcacaacaggggagtgcgcaggaagcgccaccgcccggagagttg
ctgctgattgataagccgcttgattggacgtcgtttgatgtggtggcaaaagtgcgtaac
acctaccgcaaatgtggctctaagcgtaaagtggggcattgtggtacgcttgatcctaaa
gctacgggtttgcttattgttgccacagggcgcaaaaccaaagaaatttcacagcttgag
caactcgataaagtatatgatggtgttatcaagctgggagccatcactgccagccacgat
accgaaacacctgaagagcagttgtgtgatgtagcgcatttgagcgaagccgaacttcat
gccgttgcagcaacctttattggcaatcgtttgcagcagccacccatgcactccgccgct
tggcacaatgggcgtcgcttatatgaacatgcccgcaaaggtgaggttattcgtgaacgt
aaagcgcgcgaaattgtggtgcatcgctttaccataaccaacgttgcattgccgtttgtt
tcgtttgagctgcatgtttccaaaggagcctacattcgcgttatagccgatgagtttggc
gcagcgttgggcgttggcggctatcttgcggcgcttcgccgtacagcaattggggagtgg
cagttaaccaatgcgctttcagtaaacgatactattgagcagattcataacaacgcctca
aaaggtgctttgtgtggcactgcctccactatacatcctgcaacataa
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