Chlorobium chlorochromatii: Cag_1824
Help
Entry
Cag_1824 CDS
T00290
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cag_1824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cch03021
]
Cag_1824
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_1824
Enzymes [BR:
cch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cag_1824
Transcription machinery [BR:
cch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cag_1824
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cag_1824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ABB29075
UniProt:
Q3APK0
LinkDB
All DBs
Position
complement(2345498..2346481)
Genome browser
AA seq
327 aa
AA seq
DB search
MIYQMQMPAKIELDESSHSDSFGKFIAQPLERGYGVTLGNLMRRVLLASLPGTAITGIKI
ENVYHEFSTIQGVREDVPEIVLNLKKVRFRSQCKRSCKTTVTLVGPMEFTAGVIQPQEGE
FEVLNKDLHIATINAGTTVTLDIFIGRGRGYVPAEENRAEGMPLGFIPIDSIFTPIRNVK
FTVENTRVGQRTDYEKMILEVETDGSITPDDSISLAGRVISDHVLLFADFSPAEEEYTEE
EFKQQDDEFETMRRLLATKIEDLDLSVRSHNCLRLAEIDTLGELVSHKEDELLNYKNFGK
KSLTELKEQLDKFDLKFGMDITRYQMK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatataccaaatgcagatgcctgcaaaaatagagcttgacgaatcttctcatagtgat
agtttcgggaagtttatcgcccaaccgcttgagcgtggttatggcgttactcttggcaac
ttgatgagaagagtgttgcttgcctcgttaccgggaactgcaattacaggtatcaaaata
gagaatgtttatcatgagttctctactattcagggcgttcgcgaagatgttcctgaaatt
gtgttaaatcttaaaaaggttcgctttcgatcacaatgtaagcgtagttgcaaaaccacg
gtaacattggttggtcctatggaatttaccgcaggtgttattcagccgcaagaaggtgag
ttcgaggttcttaataaggatttacatattgcgactatcaatgcgggtacaaccgttacg
cttgatatttttataggacgtggtcgtggttatgtgcctgctgaagaaaatcgtgctgaa
ggaatgccgcttgggtttattccaattgactcgatttttacccctattcgtaatgtaaag
tttacggttgaaaatactcgtgtggggcagcgtactgattatgaaaaaatgattcttgag
gttgagactgatggttcaattactcctgatgattccattagtttagcaggaagagttatt
tctgatcatgttttactttttgctgatttctctcctgctgaagaggaatacacagaagaa
gagttcaagcagcaagatgatgagtttgaaacgatgcgtcgtttgttagcaacaaaaatc
gaagatcttgatttatcggttcgctcacacaattgcttgcgtcttgctgaaattgatacg
cttggagagttagtttcgcataaggaagatgagttgttgaattacaaaaactttggtaag
aagtcgcttaccgagcttaaagagcaacttgataagtttgatcttaagtttggtatggat
attacccgttaccaaatgaagtaa
DBGET
integrated database retrieval system
