Chlorobium chlorochromatii: Cag_1888
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Entry
Cag_1888 CDS
T00290
Name
(GenBank) carotenoid isomerase, putative
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch00906
Carotenoid biosynthesis
cch01100
Metabolic pathways
cch01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Cag_1888
Enzymes [BR:
cch01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
Cag_1888
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
FAD_binding_3
FAD_oxidored
Pyr_redox_2
Thi4
HI0933_like
GIDA
Pyr_redox_3
AlaDh_PNT_C
TrkA_N
DUF6831
Motif
Other DBs
NCBI-ProteinID:
ABB29138
UniProt:
Q3APD7
LinkDB
All DBs
Position
complement(2399583..2401100)
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AA seq
505 aa
AA seq
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MADKRADVIVIGAGIGGLTTAALLQERGIQTVVFEKNRYAGGSCSAFRREGYTFDAGASV
FYGFGDNASSGTLNLHTRIFRKFGIKVATVPDSVQIHYHLPNGFSVAASHNRQQFLAALK
ARFPHEAEGIERFYEELTAVCDILRAMPAGSLEDVVHLASVGAAHPLKTVALALKSFRSM
GKTARRYIRDEELLRFIDIEAYSWAVQDATATPLVNAGICLADRHYGGINYPIGGSGAIP
EGLCKAFQQHGGTLNYQAEVVEILLEAGEARGVRLADGTVHYAKVVISNATIWDTFNRMV
KDVRYRVEEDRFLRAPSWFQLFLGVDSRVIPEGFNVHHIIVDNWQSYQQLGGTLYFSAPT
ILDPSLAPAGHHIIHAFVTDEVACWSNYERGSSAYRAAKEEKAAALIARIERIVPELSSA
IKLKVLATPLTHERYLNRYKGSYGALLKPGQTILQKPQNTTPVRNLYAVGDSTFPGQGVI
AVTYSGVSCASYVARRFGKPLEELG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaagagctgacgttattgtgattggggcaggcattggtggcttaactacc
gccgccttgcttcaagagaggggaattcaaaccgtggtgtttgaaaaaaatcgctatgct
ggtggcagttgctcggcgtttcgccgcgaaggctacacctttgatgctggggcatcggtt
ttttatggttttggcgataatgcttcaagcggaacgcttaatttacatactcgcattttt
cgcaagtttgggattaaggtggcaacggtgcccgattctgtgcaaattcactaccatctt
cccaatggattttcggtagccgcaagccataatcggcagcaatttttagctgcgctgaaa
gcccgttttccgcatgaagctgagggaattgagcgcttttacgaggagctaacagccgtc
tgcgatattttacgcgctatgcctgctggctcgttagaagatgttgttcacttagcctca
gttggcgctgctcatccgttaaaaactgttgcattggcgctgaaaagttttcgctccatg
ggcaaaacagctcgccgctacattcgagatgaagagctgctccgctttattgacattgaa
gcttattcgtgggcggtgcaggatgctacggcaacaccgcttgtgaatgcaggcatctgc
cttgccgatcgccattatggtggcattaactatcccatcggcggttcaggcgcaattccc
gaaggactttgcaaagcctttcagcaacacggtggtacgcttaactatcaagctgaggtg
gtagaaattctcttggaagcgggtgaagcgcgaggtgtgcggttagcggatggcacggtg
cattatgccaaagtggttattagtaatgcaaccatttgggacacctttaatcggatggta
aaggatgtgcgttaccgtgttgaggaggatcgctttttgcgggcaccaagttggtttcag
ctttttcttggtgtggatagccgtgtaattccagaaggctttaacgttcaccatattatt
gtggataattggcaaagttaccagcagcttggcggcactctttatttttcggctcccacc
attcttgatccatcattagcacctgcagggcatcatattattcatgcttttgttaccgat
gaggttgcatgttggagcaactacgagcgtggtagtagcgcctaccgtgcagccaaagag
gaaaaagcagccgctcttattgctcgcattgagcgcattgtgcctgagctttcgtcggcg
attaagctgaaagtgcttgctacgccgctcacgcatgaacgctacctcaatcgttataaa
ggctcgtatggagcactgttaaagcccggtcaaaccattttgcaaaagccacaaaacaca
acgcccgtgcgcaatttatatgcggtgggcgatagtacttttcccgggcagggagtaatt
gcggttacctattcgggtgtttcgtgcgcttcgtatgtggcgcgccgttttggcaaaccg
cttgaggagttggggtag
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