Chlorobium chlorochromatii: Cag_2000
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Entry
Cag_2000 CDS
T00290
Name
(GenBank) DNA-binding protein Fis / transcriptional regulator, Fis family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
cch
Chlorobium chlorochromatii
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cch03000
]
Cag_2000
Transcription factors [BR:
cch03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cag_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
AAA
AAA_2
HTH_8
AAA_3
GAF_3
Mg_chelatase
AAA_16
bpMoxR
HTH_30
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABB29248
UniProt:
Q3AP27
LinkDB
All DBs
Position
complement(2535074..2537176)
Genome browser
AA seq
700 aa
AA seq
DB search
MPITHSLHELHRLMRTISNAIGSLHDPQELFHTIITQLRLFFAFDSAAIITLDNNQRHCS
LFFEMLRFQLPEGFVRYQRPVAGSWIEPHVEAQKVAVIRLRDSLEHFPVDVELRQHLLEL
GLKQAVLSPLRAGGKVIGFLTFVFQEEQEWLDEECELLATVSTPIAVAVSNALAYEELRK
REAQTAMQLAVNNALLTIRERNSMMLAVCEQVQKLLPCTFLGIRVMDKEGNYRLYDNFRL
QPDGAFAPVTAALDMENYDSIARASFDLAIIGGYYGGNSFLELCARFPILEHVRQKYGIC
SFLSLPLWELPASRAGLIISTTMRPFDGHDQATANLIVPQLSLALQNYLAFEEINELRHK
LEGERSCLIEEITATHHVGEIIGSSSALTAVLYRLQQVAPTDATVLIQGETGTGKELFAR
ALHNLSARSKRALIKVNCATLPASLIESELFGHEKGSFTGATERRIGKFELAEGGTIFLD
EIGELPLELQAKLLRVLQEREFERLGGRHVIRANVRVIAATNRNVEQEVASGRFREDLYF
RLNVVPLHVPPLRERRDDIALLANHFANRYAREFSKPNRPIRQNDMQRLLGREWKGNIRE
LAHMVEQAVILSEGSTLDFATILAPQQTLNAPTNRAISSLRTMRAFEEEMIAMEKQLILD
TLEATGGRVSGSGGAAERLAMHPKTLYTRIATLGLSKRYG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcacccactctttgcacgagctgcatcggctgatgcgaaccatcagcaacgcc
attggctctcttcacgatcctcaagagctattccataccattataactcagctccgcctc
ttttttgctttcgattctgctgccattattaccctcgacaacaatcagcgccattgttct
ctcttttttgaaatgctgcgttttcaattgcctgagggttttgtgcgttatcaacgccct
gtggcaggctcgtggattgagccgcatgtggaggcgcaaaaggttgccgttatccgtttg
cgcgattcacttgagcatttccccgttgatgttgagttacgccaacatttgcttgagctt
ggattaaagcaagcagtgctttcgcctttgcgggcaggtggcaaggtgattggttttttg
acctttgtttttcaagaagagcaggagtggcttgatgaggagtgtgagctcttagctacc
gtttccacgcctattgccgttgccgtgagcaatgcgttagcttacgaggaactccgtaag
cgggaggcgcaaaccgctatgcagcttgccgttaacaatgcgttgcttaccattcgtgag
cgcaatagcatgatgcttgcggtgtgtgagcaggtgcaaaagttgctgccttgtaccttt
cttggcattagggtgatggataaggagggcaactatcgcttgtacgataactttcgtctt
cagcctgatggagcctttgcgcctgtaactgcggcacttgatatggagaattacgactcc
attgcccgtgcaagttttgatttagccatcattggtggttactacggcggcaacagcttt
cttgagctttgcgctcgctttccaattttagagcatgttcgccaaaaatatggcatttgc
tcattcttgagccttccgttatgggagctgccagccagccgtgctgggcttattatttct
accactatgcgcccttttgatgggcacgatcaagcaacggcgaatcttattgtgccgcaa
ctttcgcttgccttgcaaaactatcttgcctttgaagaaattaacgagttgcgccataag
cttgagggtgaacgaagctgccttattgaagagattacggcaacgcatcatgttggggaa
attatagggagcagctctgcgttaactgccgtgctctatcgcctccagcaagttgcgccc
accgatgccaccgtacttattcaaggcgaaacgggcacaggtaaagagctttttgcgcgt
gccttgcacaacctttcagcccgaagcaaacgcgctcttattaaggtgaactgtgccacc
cttcccgcctcgcttattgagtcggaactttttggacatgaaaaagggagctttacggga
gccacagaacggcgtattggtaaatttgagttagccgaagggggcactatttttttggat
gaaattggggagctgccacttgagttgcaggcaaagctgctacgcgtgttgcaagagcgt
gaatttgaacggcttggtggacgccacgttattcgtgcaaatgtgcgcgttattgctgct
accaatcgcaatgtagagcaagaggttgcttcagggcgattccgcgaagacctctatttt
cgccttaacgtggtgccacttcacgttccaccgcttcgtgaacggcgcgatgatattgct
ctgcttgccaaccactttgcgaaccgctacgcccgtgagtttagcaagccaaaccgtccc
atccgccaaaacgatatgcaacgcttgctcgggcgcgaatggaaaggcaacattcgtgaa
cttgcccacatggttgaacaagccgttattctctcggaaggctcgacgcttgatttcgca
accattcttgctccccaacaaacactcaatgctcctacaaaccgtgctatctccagcctc
cgcactatgcgcgcctttgaggaggaaatgattgcgatggaaaagcagcttattcttgat
actcttgaagcaacgggtggacgggtaagtggctctggaggtgctgccgaacggcttgct
atgcaccccaaaacgctttatacccgtattgcaacgttaggattaagcaagcggtatgga
tag
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