Entry |
|
Symbol |
gyrA
|
Name |
(GenBank) DNA gyrase subunit A
|
KO |
|
Organism |
ccha Caldicellulosiruptor changbaiensis
|
Brite |
KEGG Orthology (KO) [BR:ccha00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:ccha03032]
ELD05_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:ccha03400]
ELD05_00035 (gyrA)
Enzymes [BR:ccha01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ELD05_00035 (gyrA)
DNA replication proteins [BR:ccha03032]
Prokaryotic type
DNA Topoisomerases
ELD05_00035 (gyrA)
DNA repair and recombination proteins [BR:ccha03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ELD05_00035 (gyrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6577..9006
|
AA seq |
809 aa
MEELDFRIIPVEIQEEMKRSYIDYAMSVIVSRALPDVRDGLKPVHRRILYAMNEIGLTPD
KPYRKSATVVGHVLAKYHPHGDAAVYESLVRMAQDFSMRHPLVDGHGNFGSIDGDPPAAM
RYTEARMSRIAVEMLRDIEKETVDFMPNFDESAKEPKVLPSRFPNLLVNGSQGIAVGMAT
NIPPHNLAEVVDAIVYMLDHPDATLDDIMKIIKGPDFPTGGFIIGKKGIKEAYSTGKGKI
VVRAKTTIEQTSKGRQRIVVTELPYMVNKARLIEKIAELVRDKKIEGISDIRDETDKEGL
RIVIEIKKDADANVVLKQLYKNTQLQDTFGIIMLALVDNQPKVLTLLDMLNYYIEHQKDV
IVRRTKYDLKKAEERAHILEGLKKALDHIDEIISIIRSSRTVNEAKERLIERFEFTEVQA
QAILDMRLQRLTGLERQKIEEELAELLKMIEYYKNVLANEAMVKEIIKKEILEIKEKYKD
ERRTKIIQDEQEDFEEEELIQEQDTVITLTHFGYIKRLPLDTYKSQKRGGKGITGISTRE
EDFVEEVFVTTTHHYILFFTDKGKVYKLRAYEVPEASRQAKGTAIVNLIQIGKDEKITAC
MTVKDFKEGFLMMCTKNGTIKKVLLSEFENTTKAGKKAITLSEDDCLIDVKLTSGNDEIV
LVSSGGYCVVFNENDVRVMGRSAQGVKGMTLEDGDFVVGMEKVSDGKYLLCVTENGFGKR
SDIEEYRKTKRGAKGVLTYKVTEKTGRIVDIKMVNDNDEIMLCSTDGVFIRLEIDQVPIQ
GRSTQGVKLMRIDGDSIKVSSIARVREEE |
NT seq |
2430 nt +upstreamnt +downstreamnt
atggaagagctggatttcaggataattcctgttgagatacaagaagaaatgaaacgaagc
tatatagactatgcaatgagcgtaattgtgtcccgtgcgctgccagatgttcgcgatggt
ctaaaacctgttcacagaagaatactttatgcaatgaacgagataggtcttacacctgac
aagccttacagaaagtctgcaacagttgtggggcatgttttggctaaataccatccacac
ggcgatgcagctgtgtacgaaagccttgttcgaatggcacaggacttttccatgcgccac
cctcttgttgacgggcatggaaattttggatcgattgacggtgacccacctgctgctatg
cgttacacagaagcgcgtatgagcagaattgcggtggagatgcttcgtgatattgaaaaa
gaaacagtcgattttatgccaaactttgatgagtctgcaaaagagccaaaggttttgcca
tcgcgtttcccaaaccttttggtaaatggcagccaaggtattgcagttggtatggcaaca
aacattccaccgcacaacttggcagaagttgtagatgcaattgtgtacatgcttgaccat
ccagatgctaccttagatgacattatgaagataattaaagggcctgattttccaacaggt
ggatttataatcggcaaaaaggggataaaagaggcatattcaactggtaagggcaagatt
gtggtgcgtgcaaagactacgattgagcagacatctaagggaagacagagaatagttgta
acagagcttccttacatggtaaacaaggcacgacttatcgaaaagattgctgagcttgtg
cgggacaagaagattgaaggaatttcagatataagagatgagactgacaaagagggcttg
aggattgtaattgagataaagaaggatgccgatgcaaatgttgtgctaaaacagctttac
aagaacacccaactgcaagacacatttggaataataatgcttgcgcttgttgacaatcag
ccaaaggtcctgactcttttggatatgctaaactactacattgaacatcaaaaggatgta
attgtaaggcgaacaaaatatgacctcaaaaaagctgaagaaagggctcacatcttagaa
gggctcaaaaaagcacttgaccacatagatgagattatctcaatcattcgttcatcaagg
acagtaaatgaggcaaaggaaaggctaattgaaagatttgaatttacagaggtccaagcg
caggcaatacttgacatgagactgcaacgcctcactggccttgagagacaaaagattgaa
gaagagcttgcggagcttcttaagatgattgagtactacaaaaacgtgcttgcaaacgag
gcaatggtaaaagagattatcaaaaaagagattttagagataaaagaaaagtacaaggat
gagagaaggacaaagataattcaagatgaacaagaagattttgaagaagaagaacttatc
caagaacaagacacagtaattacacttacacactttggatacatcaaaagacttccactt
gacacatacaagagccagaaaagaggcggcaagggcataacaggaatctcaacaagagaa
gaggactttgttgaagaggtatttgtcacaacaactcatcactacatcttgttctttaca
gacaaaggaaaagtgtataagctcagagcatatgaagtgccagaggcatcaagacaggca
aaaggcacggcaattgtcaatctcattcagattggcaaagatgaaaaaatcacagcttgc
atgactgtgaaggacttcaaagaaggcttcttgatgatgtgcaccaaaaacggaacaatc
aaaaaggtgcttttgagcgagtttgaaaatacaacaaaggcaggcaaaaaagcaataact
ttgtctgaggatgactgcctgattgatgtaaaactcacatctggcaatgacgagattgtt
cttgtttcaagcggagggtattgtgttgttttcaatgaaaatgatgtaagagttatggga
aggtcagcccaaggcgtcaagggtatgacccttgaagatggcgactttgttgttggaatg
gaaaaggtaagcgatggcaagtaccttttgtgcgtaacagaaaacggttttggaaaaaga
agcgatattgaggagtacaggaaaacaaaacgcggcgcaaaaggagttttgacatacaag
gtcacagaaaagacgggcagaattgttgatattaagatggtaaatgacaatgatgagata
atgctgtgctcaacagatggagtgtttattaggcttgaaatagatcaggtgccaattcaa
ggaaggtcaacccaaggtgttaaactcatgcgaatagacggcgatagcataaaggtgtcg
tcaattgcaagggttagagaggaagaataa |