Caldicellulosiruptor changbaiensis: ELD05_00420
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Entry
ELD05_00420 CDS
T05905
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
ccha
Caldicellulosiruptor changbaiensis
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ccha02048
]
ELD05_00420 (cas4)
Enzymes [BR:
ccha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
ELD05_00420 (cas4)
Prokaryotic defense system [BR:
ccha02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
ELD05_00420 (cas4)
Subtype I-B factors
ELD05_00420 (cas4)
Subtype I-C factors
ELD05_00420 (cas4)
Subtype I-D factors
ELD05_00420 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
ELD05_00420 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AZT89268
UniProt:
A0A3T0D250
LinkDB
All DBs
Position
complement(102162..102665)
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AA seq
167 aa
AA seq
DB search
MEKTIDVKGSILQAYIVCKRQAWLLSRNIGPSPDNPFLEIGKLISQEYYKHDKKEVYFDG
VVLDLIRQENEVLLVGEIKKSSRAKSAAILQLKFYLYKLFKNNINAHGKLLIPEEKKTFD
VQLSFDDITEIENLIEEISLFLSSPSPPQPQKIKACSKCSYKEFCWA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagaccattgatgtaaaaggctctattttgcaagcctacattgtttgtaaaaga
caagcttggcttttgtcacgaaacattggaccatcgccagataatccctttttggagata
ggcaagttaatatcgcaggagtattacaaacacgataaaaaggaagtgtactttgacggg
gtggttttagacttaatccgacaggaaaatgaggttttgctggttggggagataaaaaag
tcgtcacgagcaaaaagcgctgctatcttgcaactcaaattctacctttacaaactcttt
aaaaacaatataaacgcacatggcaaacttctaatccctgaagaaaagaagacatttgat
gtccaactttcctttgatgacattacagagattgaaaacctcattgaagaaatttctctt
tttctttcaagcccttcaccaccccagccgcaaaaaatcaaagcgtgttcaaaatgttcg
tataaggagttttgctgggcatga
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