Caldicellulosiruptor changbaiensis: ELD05_02180
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Entry
ELD05_02180 CDS
T05905
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ccha
Caldicellulosiruptor changbaiensis
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccha03021
]
ELD05_02180
Transcription machinery [BR:
ccha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ELD05_02180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
Trp_repressor
KORA
HTH_19
5_nucleotid
HTH_25
Sigma70_ECF
Phage_antitermQ
MarR
NUP120_helical_2
Motif
Other DBs
NCBI-ProteinID:
AZT89575
UniProt:
A0A3T0D2Y8
LinkDB
All DBs
Position
494104..494877
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AA seq
257 aa
AA seq
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MVDEKKTINLDDAEIDRLFEEYRKTKDINLRNELVNRHLYIAEIVAKKFVNRGIEYDDLY
QVACMALINAVERFEPNKGYKFTSFATPTIMGEIKRYFRDRASLIRLPRRIYETSAKIKL
ATEILSTKLKRPPKIEEIAQHIGITPEEVLEVMEASNNYLPQSLDQTMYEDEEMTLGDVL
GKSDENLVQIENTEAVKKAIDKLSPLEREFVQKRFFEEKTQREIAEEMKVSQMYISRLEK
KVLKKLKDFIDGTKAPI
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgagaaaaagactataaatcttgatgatgctgaaatagatagactcttcgaa
gagtatcgaaagacaaaagatataaacctgagaaatgagcttgtcaacaggcatttgtat
atagctgaaattgttgccaaaaagtttgtaaacaggggaatagaatatgatgatttatat
caagttgcatgtatggcgctaataaatgcagttgagaggtttgaacccaacaaaggttat
aaatttacaagctttgcaacgcctacaattatgggtgaaattaagcgctattttagagac
agggcatcattaatcaggcttccacgaaggatttatgagacatcagctaaaataaaactt
gcgaccgagatactttctacaaagctaaagcggccaccaaagatagaagagatagctcag
catataggcattacacctgaagaagtcttagaagtaatggaggcatcgaacaactatctt
ccacagtcacttgaccagacaatgtacgaggatgaagagatgaccttaggagatgttctt
ggaaagagtgatgaaaaccttgttcagatagagaacactgaagcagtaaaaaaggcaata
gacaagttaagtcctttggaaagagaatttgttcaaaagcgcttttttgaggaaaagacc
caaagagagattgctgaagagatgaaggtatcgcagatgtacatttcgaggcttgaaaag
aaggttttaaaaaagctaaaagattttattgatggaacaaaggcacctatttga
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