Caldicellulosiruptor changbaiensis: ELD05_02735
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Entry
ELD05_02735 CDS
T05905
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
ccha
Caldicellulosiruptor changbaiensis
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccha03019
]
ELD05_02735 (rapZ)
Messenger RNA biogenesis [BR:
ccha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ELD05_02735 (rapZ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_24
SKI
AAA_23
AAA
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AZT89657
UniProt:
A0A3T0D312
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All DBs
Position
602985..603857
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AA seq
290 aa
AA seq
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METVIITGMSGAGKSLAIRAFEDMGFFCIDNLPPQFLPKIAELASASNDKISRIAAVIDI
RGGELFDDFKDVLNDLKKGTYNFKVLFLDAHDNVLVQRYKETRRKHPLSFESDGSILEAI
QKEREKLEDIKKYADFIIDTSTLSPRDLKEKLFEIFSAQRSQETMLITVMSFGFKYGLPL
DADLVFDVRFIPNPFYIEELKHKTGKEKEVKEYVLKWDVTKEFLKKFFDLILFLIPNYAE
EGKAQLVIAIGCTGGKHRSVTIAEELFELIKKNGYKASIFHRDIEKDIKG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttggagacagtgataataaccggaatgtctggcgctggtaagagcttggcaattagggca
tttgaagacatgggatttttttgtatagacaaccttcctccacagtttttgcccaagatt
gctgagcttgcaagtgcaagcaatgacaagatttcaaggattgcagcagttattgacatc
cgcggtggagagctttttgacgatttcaaggatgttttaaatgatctcaaaaaagggaca
tacaacttcaaagttctctttttggacgcgcatgataatgtattggtccaaagatataaa
gaaacaagacgaaaacatcctcttagttttgagagtgacggaagcatcttagaggccatc
caaaaagaaagagaaaagcttgaggatataaaaaaatatgcagattttatcatcgatacc
tctactctttcgccgagggacttaaaagaaaaactttttgagattttttctgctcaaaga
tctcaggaaactatgttaataacagttatgtcttttggtttcaaatatggacttcctttg
gatgccgacctggtattcgatgtgagattcattcctaatcctttttatatagaagagcta
aaacacaagacgggaaaggaaaaagaggtcaaagaatatgtgctaaagtgggatgtgaca
aaggaatttttaaaaaagttttttgatttaattttattcttaataccgaattatgcagaa
gaagggaaagcacaacttgtaattgcaattggctgcacgggtgggaagcatcgatcggtt
acgattgctgaagaacttttcgagcttatcaaaaaaaatggatataaggcgtcgattttt
catagagatatagagaaagatataaaagggtga
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