Caldicellulosiruptor changbaiensis: ELD05_03625
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Entry
ELD05_03625 CDS
T05905
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ccha
Caldicellulosiruptor changbaiensis
Pathway
ccha03030
DNA replication
ccha03430
Mismatch repair
ccha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ELD05_03625 (dnaX)
03430 Mismatch repair
ELD05_03625 (dnaX)
03440 Homologous recombination
ELD05_03625 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccha03032
]
ELD05_03625 (dnaX)
03400 DNA repair and recombination proteins [BR:
ccha03400
]
ELD05_03625 (dnaX)
Enzymes [BR:
ccha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ELD05_03625 (dnaX)
DNA replication proteins [BR:
ccha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ELD05_03625 (dnaX)
DNA repair and recombination proteins [BR:
ccha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ELD05_03625 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_5
RCF1-5-like_lid
AAA_14
AAA_19
AAA_2
AAA_assoc_2
TIP49
Rad17
DNA_pol3_a_NII
ResIII
ORC-CDC6-like
DnaX_C
AAA_18
AAA_28
AAA_7
TsaE
LysX_preATP_grasp
RNA_helicase
nSTAND3
TniB
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AZT89816
UniProt:
A0A3T0D464
LinkDB
All DBs
Position
781948..783555
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AA seq
535 aa
AA seq
DB search
MHIALYRKYRPKVFEDVVAQEHITKTLKNQIKQDKVAHAYIFTGPRGTGKTTTAKIMARA
VNCVNPKDGNPCNECDVCQSILNEKTLDVLEIDAASNTSVNDVRQIRDEVRYPPSMCKKR
VYIIDEVHMLSTGAFNALLKTLEEPPAHALFILATTDIQKVPATILSRCQRFDFKRISVK
DIYERLKKVVELEKISIDDQALYLISQKAEGALRDALTILERCVNTSDEHISYKFVANLL
GVTSTEIVKEYLNAIVENDSNKGLRVVNRLWDEGMDVNTFLEESIKMLRNALILRLGTQN
VLLDMMDEDKNFVTNLSNLLDSNRIVSVIKMLIDTANQIRWTRFPKVLLEINTIKLCDMQ
MDTSFEGLNERVKKLEIKLSQILENPSLLQSLKTEKTLSLSTAAGEKSGSSEVNKEKMLL
PDADVSEVLERWAEVKEAVKEEKPGLSQVLQSASIKFENGLKICFKEEDSVFAELLKRNL
DYFKSVLKKVVGYDGEVEVEVNSNSSKAKQEPQSDEEIMNKLKSIFPDTEITIKE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcatatagcgctatatagaaaatacagaccaaaagtgtttgaggatgttgttgcccag
gagcatataacaaagacactgaaaaatcaaataaaacaagacaaggttgcccatgcatat
atctttacagggccgcgtggcactggcaagacaaccaccgctaagataatggcaagggca
gtaaactgtgtcaatcctaaggatgggaatccttgtaatgaatgtgatgtttgccagagt
attttaaatgaaaagacacttgatgttttggagatagacgcagcatccaacacaagcgta
aacgatgtaagacagataagagatgaggttagatacccaccttcaatgtgcaaaaaaaga
gtatatataatagacgaggttcatatgctctcaacaggggctttcaatgcacttttaaaa
acgcttgaagagcccccagcccatgctcttttcattttagcaacaacagatatacaaaag
gtgccagctacaattttgtctcgctgccagagatttgatttcaagagaatttctgtaaag
gatatatatgaaaggctcaaaaaggttgttgagcttgaaaaaatctcaattgacgaccaa
gcactatatcttatttctcaaaaagcagagggagcattaagagatgcccttacaatttta
gagagatgtgtgaacacctctgatgagcatatatcatacaagtttgttgcaaacttactg
ggcgttacctcaacagaaattgtgaaagagtatttgaatgcaattgtcgagaatgactct
aacaagggtttgagagtggtaaacagactttgggacgaggggatggatgtcaatacattt
ttagaagagagcataaaaatgctgagaaatgctttgattttacgtttaggtacccagaac
gttttgcttgacatgatggatgaggacaagaactttgtaacaaacctttctaacctcctt
gattcaaatagaattgtgtctgttataaagatgttaattgacactgcaaaccagataaga
tggacaaggtttccaaaggtcttgcttgaaataaacacaattaagctttgtgatatgcag
atggacacatcatttgaaggactaaatgaaagggtaaaaaaacttgaaataaaactttca
cagattttagaaaatccgagtctacttcaaagtttaaaaacagaaaaaactctttcatta
tccacagcagcgggtgagaaatcagggtcctctgaagtcaacaaagagaaaatgctcctt
ccagatgcagatgtttctgaagttttagaaagatgggctgaagtaaaagaagcagtaaag
gaagaaaagcctggactttcgcaggttctgcaaagtgcaagcattaagtttgaaaatggc
cttaaaatctgttttaaagaagaagacagcgtctttgcagagcttctaaaaaggaatctt
gattatttcaagtctgttctaaaaaaggttgtagggtatgatggcgaggttgaagtagag
gtaaatagtaacagttcaaaagctaaacaagaacctcaatctgatgaagagattatgaac
aagctcaaaagtatcttccctgatacagagattactataaaagaataa
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